RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 KCND3Q9UK17 655 aa4.44□□□□□ -1.7
TRAPPC13-209ENST00000508304 AGO1Q9UL18 857 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-209ENST00000508304 SRPRBQ9Y5M8 271 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-209ENST00000508304 H0Y3Z8 333 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 HOXC11O43248 304 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 KRT38O76015 456 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 BAIAP3O94812 1187 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 TNNT1P13805 278 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 CST5P28325 142 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 CLNS1AP54105 237 aaKnown RBP4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 PNLIPRP1P54315 467 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 TLE2Q04725 743 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 PDCLQ13371 301 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 SNTA1Q13424 505 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 EFHC1Q5JVL4 640 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 STPG1Q5TH74 334 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 C1orf122Q6ZSJ8 110 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 WDR5BQ86VZ2 330 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 TMTC1Q8IUR5 882 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 BRSK2Q8IWQ3 736 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 TMEM57Q8N5G2 664 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 CEP70Q8NHQ1 597 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 CEP76Q8TAP6 659 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 SPATA20Q8TB22 786 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 STT3BQ8TCJ2 826 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 HDAC7Q8WUI4 952 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 RILPL2Q969X0 211 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 ZBTB10Q96DT7 871 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 TIGD1Q96MW7 591 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 IL17FQ96PD4 163 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 ABHD16BQ9H3Z7 469 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 ACAD9Q9H845 621 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 NOD2Q9HC29 1040 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 SLC22A11Q9NSA0 550 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 OLA1Q9NTK5 396 aaKnown RBP4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 NRBP1Q9UHY1 535 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 FEM1BQ9UK73 627 aa4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 RRP7AQ9Y3A4 280 aaKnown RBP4.43□□□□□ -1.7
TRAPPC13-209ENST00000508304 ANKRD18BA2A2Z9 1011 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 ANTXRLA6NF34 631 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 B9A039 149 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 ATP1A3P13637 1013 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 ANOS1P23352 680 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 PNPLA4P41247 253 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 RXRGP48443 463 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 ACTR2P61160 394 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 NUCB1Q02818 461 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 LIN54Q6MZP7 749 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 SYT13Q7L8C5 426 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 TBC1D1Q86TI0 1168 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 EXOC3L1Q86VI1 746 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 TMC8Q8IU68 726 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 NAGSQ8N159 534 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 TMTC2Q8N394 836 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 POC1AQ8NBT0 407 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 C1orf131Q8NDD1 294 aaKnown RBP4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 CSGALNACT1Q8TDX6 532 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 C2CD4CQ8TF44 421 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 THAP4Q8WY91 577 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 RRP36Q96EU6 259 aaKnown RBP4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 PGLYRP2Q96PD5 576 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 DDX23Q9BUQ8 820 aaKnown RBP4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 PLEKHA5Q9HAU0 1116 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 TBC1D22BQ9NU19 505 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 SEL1LQ9UBV2 794 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 POLG2Q9UHN1 485 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 OSGIN2Q9Y236 505 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 ADAM18Q9Y3Q7 739 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 RPS6KL1Q9Y6S9 549 aa4.42□□□□□ -1.7
TRAPPC13-209ENST00000508304 MST1RQ04912 1400 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 HSPB6O14558 160 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 SERPINI2O75830 405 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 DDAH2O95865 285 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 CAPN3P20807 821 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 YWHAQP27348 245 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 LIFRP42702 1097 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 TUBP50607 506 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 PRKAA2P54646 552 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 PRKG2Q13237 762 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 LRRC24Q50LG9 513 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 C9orf139Q6ZV77 190 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 MON1BQ7L1V2 547 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 SERPINA11Q86U17 422 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 FAM9BQ8IZU0 186 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 SCAIQ8N9R8 606 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 MIGA1Q8NAN2 632 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 CTCFLQ8NI51 663 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 HTRA1Q92743 480 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 UHRF2Q96PU4 802 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 EPYCQ99645 322 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 BARD1Q99728 777 aaKnown RBP4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 CHODLQ9H9P2 273 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 PREBQ9HCU5 417 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 BLOC1S4Q9NUP1 217 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 THAP1Q9NVV9 213 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 AASSQ9UDR5 926 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 RCE1Q9Y256 329 aa4.41□□□□□ -1.7
TRAPPC13-209ENST00000508304 SAA2-SAA4A0A096LPE2 208 aa4.4□□□□□ -1.71
TRAPPC13-209ENST00000508304 B4E171 279 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms