RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CAPZA2P47755 286 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 CPT1AP50416 773 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 SPCS3P61009 180 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 PPATQ06203 517 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 PMS2P3Q13401 168 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 PDK2Q15119 407 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 INO80DQ53TQ3 878 aaPredicted RBP10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 TYW3Q6IPR3 259 aaKnown RBP10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 RFX8Q6ZV50 586 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 BTLAQ7Z6A9 289 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 PROSER2Q86WR7 435 aaPredicted RBP10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 LYSMD2Q8IV50 215 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 CLEC4FQ8N1N0 589 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 PACRGLQ8N7B6 248 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 FAM71DQ8N9W8 422 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 SLC7A14Q8TBB6 771 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 DDX1Q92499 740 aaKnown RBP10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 RNF166Q96A37 237 aaPredicted RBP10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 ALKBH8Q96BT7 664 aaKnown RBP10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 PPP1R2P1Q96PQ5 205 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 PLIN2Q99541 437 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 ZNF251Q9BRH9 671 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 TMEM121Q9BTD3 319 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 CDADC1Q9BWV3 514 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 TINAGL1Q9GZM7 467 aaPredicted RBP10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 WWP1Q9H0M0 922 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 DDX28Q9NUL7 540 aaKnown RBP10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 PRPF19Q9UMS4 504 aaKnown RBP10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 COL4A3BPQ9Y5P4 624 aa10.9□□□□□ -0.67
PDLIM5-210ENST00000508216 IGSF1Q8N6C5 1336 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 MROH2AA6NES4 1674 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 CNTNAP1P78357 1384 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 SPEF2Q9C093 1822 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 A0A0G2JPF8 293 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 A0A1B0GVM2 712 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 TRIM75PA6NK02 468 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 PDZK1P1A8MUH7 402 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 HNRNPCL3B7ZW38 293 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 EYA2O00167 538 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 CACNB4O00305 520 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 PSMA7O14818 248 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 CYP26A1O43174 497 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 DGAT1O75907 488 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 SLC10A3P09131 477 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 HNRNPCL4P0DMR1 293 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 CD46P15529 392 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 YBX3P16989 372 aaKnown RBP eCLIP10.89□□□□□ -0.671e-7■■□□□ 12.5
PDLIM5-210ENST00000508216 MYF6P23409 242 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 OXTRP30559 389 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 SERPINB10P48595 397 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 KCNJ10P78508 379 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 ZNF91Q05481 1191 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 ADAM15Q13444 863 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 Q5BKY6 102 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 HMBOX1Q6NT76 420 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 DPY19L3Q6ZPD9 716 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 SLC9B2Q86UD5 537 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 DSELQ8IZU8 1212 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 FBXW8Q8N3Y1 598 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 PLD5Q8N7P1 536 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 IFI44Q8TCB0 444 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 SGTBQ96EQ0 304 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 PHACTR3Q96KR7 559 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 NTPCRQ9BSD7 190 aaKnown RBP10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 CCM2Q9BSQ5 444 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 NTMT1Q9BV86 223 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 TSSK1BQ9BXA7 367 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 NYXQ9GZU5 481 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 ANLNQ9NQW6 1124 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 FBXO6Q9NRD1 293 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 AAASQ9NRG9 546 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 ZNF624Q9P2J8 865 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 SERPINB13Q9UIV8 391 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 SLC27A5Q9Y2P5 690 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 TCAF1Q9Y4C2 921 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 XDHP47989 1333 aa10.89□□□□□ -0.67
PDLIM5-210ENST00000508216 ALKQ9UM73 1620 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 A0A0G2JND7 137 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 RAB19A4D1S5 217 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 HRGP04196 525 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 IFNA4P05014 189 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 CYP2D6P10635 497 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 EIF2S3P41091 472 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 FNTBP49356 437 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 RNASE9P60153 205 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 PRKD1Q15139 912 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 RTN1Q16799 776 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 ATG14Q6ZNE5 492 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 C16orf86Q6ZW13 317 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 SYDE1Q6ZW31 735 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 ANKS1BQ7Z6G8 1248 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 NT5DC3Q86UY8 548 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 COMTD1Q86VU5 262 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 SLC22A9Q8IVM8 553 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 SLC25A41Q8N5S1 370 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 TMEM102Q8N9M5 508 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 MFSD2AQ8NA29 543 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 TDRD5Q8NAT2 981 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 RDH13Q8NBN7 331 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 C3orf58Q8NDZ4 430 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms