RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TFEBP19484 476 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 RENBPP51606 427 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 HNRNPDQ14103 355 aaKnown RBP14.62□□□□□ -0.07
DDX41-208ENST00000507955 GALNT3Q14435 633 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 POLD3Q15054 466 aaPredicted RBP14.62□□□□□ -0.07
DDX41-208ENST00000507955 DBN1Q16643 649 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 MIA3Q5JRA6 1907 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 SIRPB2Q5JXA9 342 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 CNTN4Q8IWV2 1026 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 TXNDC5Q8NBS9 432 aaKnown RBP14.62□□□□□ -0.07
DDX41-208ENST00000507955 C2CD4AQ8NCU7 369 aaPredicted RBP14.62□□□□□ -0.07
DDX41-208ENST00000507955 STYXQ8WUJ0 223 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 ANKRD49Q8WVL7 239 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 HDAC10Q969S8 669 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 FUBP3Q96I24 572 aaKnown RBP eCLIP14.62□□□□□ -0.07
DDX41-208ENST00000507955 EXOC2Q96KP1 924 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 LENG8Q96PV6 779 aaPredicted RBP14.62□□□□□ -0.07
DDX41-208ENST00000507955 C1orf21Q9H246 121 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 SCOCQ9UIL1 159 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 PCDHB7Q9Y5E2 793 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 CDY1Q9Y6F8 540 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 ARHGEF37A1IGU5 675 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 ALDH2P05091 517 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 INHAP05111 366 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 FESP07332 822 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 ALOX15P16050 662 aaPredicted RBP14.61□□□□□ -0.07
DDX41-208ENST00000507955 TSPAN8P19075 237 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 GLDCP23378 1020 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 CD151P48509 253 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 SERPINH1P50454 418 aaKnown RBP14.61□□□□□ -0.07
DDX41-208ENST00000507955 COPAP53621 1224 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 CDC16Q13042 620 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 MSLNQ13421 630 aaPredicted RBP14.61□□□□□ -0.07
DDX41-208ENST00000507955 LSM12Q3MHD2 195 aaKnown RBP14.61□□□□□ -0.07
DDX41-208ENST00000507955 LIPMQ5VYY2 423 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 MSANTD2Q6P1R3 559 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 PIM3Q86V86 326 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 PYDC1Q8WXC3 89 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 ILKAPQ9H0C8 392 aaPredicted RBP14.61□□□□□ -0.07
DDX41-208ENST00000507955 TNFRSF12AQ9NP84 129 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 TMEM248Q9NWD8 314 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 TMEM161AQ9NX61 479 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.61□□□□□ -0.07
DDX41-208ENST00000507955 ARL5AQ9Y689 179 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 PDE4DIPQ5VU43 2346 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 A0A0U1RQS6 177 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 GRID2O43424 1007 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 TLR5O60602 858 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 ZCCHC18P0CG32 403 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 ATF6P18850 670 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 MSX2P35548 267 aaPredicted RBP14.61□□□□□ -0.07
DDX41-208ENST00000507955 CUL3Q13618 768 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 TCHHL1Q5QJ38 904 aaPredicted RBP14.61□□□□□ -0.07
DDX41-208ENST00000507955 NXNQ6DKJ4 435 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 FUT10Q6P4F1 479 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 TTC16Q8NEE8 873 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 ARRDC2Q8TBH0 407 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 BTN2A3PQ96KV6 586 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 NSMCE3Q96MG7 304 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 TSNARE1Q96NA8 513 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 CYP2S1Q96SQ9 504 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 TSC22D3Q99576 134 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 SEMA3CQ99985 751 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 ECSITQ9BQ95 431 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 DRC3Q9H069 523 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 TCF7L2Q9NQB0 619 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 NDE1Q9NXR1 346 aa14.61□□□□□ -0.07
DDX41-208ENST00000507955 TMEM189-UBE2V1I3L0A0 370 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 RAMP2O60895 175 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 KLHL2O95198 593 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 GJB5O95377 273 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 SLC6A4P31645 630 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 AP2B1P63010 937 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 MRPL58Q14197 206 aaKnown RBP14.6□□□□□ -0.07
DDX41-208ENST00000507955 PTPRRQ15256 657 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 TBCCQ15814 346 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 HPS6Q86YV9 775 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 DEFB107AQ8IZN7 70 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 BLOC1S5Q8TDH9 187 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 PHF21BQ96EK2 531 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 TBATAQ96M53 351 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 VCXQ9H320 206 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 SQORQ9Y6N5 450 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 GREB1Q4ZG55 1949 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 MATN2O00339 956 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 CABYRO75952 493 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 SLC4A1P02730 911 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 KCNC1P48547 511 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 RPL14P50914 215 aaKnown RBP14.6□□□□□ -0.07
DDX41-208ENST00000507955 CCNIQ14094 377 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 TMCO4Q5TGY1 634 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 TMEM207Q6UWW9 146 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 LGI2Q8N0V4 545 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 ATP6V0D2Q8N8Y2 350 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 SNX31Q8N9S9 440 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 OR7D4Q8NG98 312 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 CATSPER2Q96P56 530 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 TUBGCP5Q96RT8 1024 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 POMKQ9H5K3 350 aa14.6□□□□□ -0.07
DDX41-208ENST00000507955 TLR8Q9NR97 1041 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms