RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 IRF2BP2Q7Z5L9 587 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 SDCCAG8Q86SQ7 713 aaPredicted RBP8.17□□□□□ -1.1
SCN1A-207ENST00000507401 PRPF39Q86UA1 669 aaKnown RBP8.17□□□□□ -1.1
SCN1A-207ENST00000507401 FAM131BQ86XD5 332 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 NAXDQ8IW45 347 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 IFT20Q8IY31 132 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 TBC1D3Q8IZP1 549 aaPredicted RBP8.17□□□□□ -1.1
SCN1A-207ENST00000507401 EMC1Q8N766 993 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 DCAF4L2Q8NA75 395 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 ATP11CQ8NB49 1132 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 OR14C36Q8NHC7 312 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 SLC30A5Q8TAD4 765 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 SNX19Q92543 992 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 NTAN1Q96AB6 310 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 PSMB7Q99436 277 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 CDC6Q99741 560 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 ACE2Q9BYF1 805 aaPredicted RBP8.17□□□□□ -1.1
SCN1A-207ENST00000507401 EDEM3Q9BZQ6 932 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 CEP44Q9C0F1 390 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 LZTFL1Q9NQ48 299 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 METTL5Q9NRN9 209 aaKnown RBP8.17□□□□□ -1.1
SCN1A-207ENST00000507401 ETAA1Q9NY74 926 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 MPP6Q9NZW5 540 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 ZNF212Q9UDV6 495 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 VPS51Q9UID3 782 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 PCOLCE2Q9UKZ9 415 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 DMTF1Q9Y222 760 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 NEUROG3Q9Y4Z2 214 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 SNX11Q9Y5W9 270 aa8.17□□□□□ -1.1
SCN1A-207ENST00000507401 KMT2BQ9UMN6 2715 aaPredicted RBP8.17□□□□□ -1.1
SCN1A-207ENST00000507401 A0A0D9SEW6 157 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 SPAARA0A1B0GVQ0 90 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 ANKRD62A6NC57 917 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 FAM47DPA6NHR8 397 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 FLRT2O43155 660 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 PLRG1O43660 514 aaKnown RBP8.16□□□□□ -1.1
SCN1A-207ENST00000507401 ZMPSTE24O75844 475 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 PRNPP04156 253 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 PROS1P07225 676 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 VAV1P15498 845 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 RHOQP17081 205 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 CD38P28907 300 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 CHRNA3P32297 505 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 LSP1P33241 339 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 MAPKAPK2P49137 400 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 AIF1P55008 147 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 ADKP55263 362 aaKnown RBP8.16□□□□□ -1.1
SCN1A-207ENST00000507401 GEMIN4P57678 1058 aaKnown RBP8.16□□□□□ -1.1
SCN1A-207ENST00000507401 GNA12Q03113 381 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 SCAPQ12770 1279 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 CNTN1Q12860 1018 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 OVGP1Q12889 678 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 SLC45A4Q5BKX6 768 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 CFAP58Q5T655 872 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 MANEALQ5VSG8 457 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 ACAD10Q6JQN1 1059 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 WDR59Q6PJI9 974 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 C6orf89Q6UWU4 347 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 RAB44Q7Z6P3 723 aaPredicted RBP8.16□□□□□ -1.1
SCN1A-207ENST00000507401 IQCHQ86VS3 1027 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 TRIM69Q86WT6 500 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 HOMEZQ8IX15 550 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 CCDC13Q8IYE1 715 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 TEX9Q8N6V9 391 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 GBP7Q8N8V2 638 aaPredicted RBP8.16□□□□□ -1.1
SCN1A-207ENST00000507401 MFSD2AQ8NA29 543 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 OR8K1Q8NGG5 319 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 OR2A12Q8NGT7 310 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 JOSD2Q8TAC2 188 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 PIP4K2CQ8TBX8 421 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 SETD7Q8WTS6 366 aaKnown RBP8.16□□□□□ -1.1
SCN1A-207ENST00000507401 ADAMTS14Q8WXS8 1223 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 ISG20Q96AZ6 181 aaKnown RBP8.16□□□□□ -1.1
SCN1A-207ENST00000507401 ZBTB9Q96C00 473 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 DTNBP1Q96EV8 351 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 C11orf70Q9BRQ4 267 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 SPON2Q9BUD6 331 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 SCNM1Q9BWG6 230 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 MAGEH1Q9H213 219 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 CNOT10Q9H9A5 744 aaKnown RBP8.16□□□□□ -1.1
SCN1A-207ENST00000507401 ERVMER34-1Q9H9K5 563 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 EBF2Q9HAK2 575 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 IL21RQ9HBE5 538 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 LUC7LQ9NQ29 371 aaKnown RBP8.16□□□□□ -1.1
SCN1A-207ENST00000507401 ABHD10Q9NUJ1 306 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 AIPL1Q9NZN9 384 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 ARHGAP20Q9P2F6 1191 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 SARDHQ9UL12 918 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 FNDC3AQ9Y2H6 1198 aaKnown RBP8.16□□□□□ -1.1
SCN1A-207ENST00000507401 MSRB2Q9Y3D2 182 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 SNX10Q9Y5X0 201 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 EPN1Q9Y6I3 576 aaPredicted RBP8.16□□□□□ -1.1
SCN1A-207ENST00000507401 CABIN1Q9Y6J0 2220 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 SLCO1B1Q9Y6L6 691 aa8.16□□□□□ -1.1
SCN1A-207ENST00000507401 A0A1B0GTQ1 180 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 A0A1W2PR77 199 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 TCRBV5S1A1TA0A578 114 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 TMEM8BA6NDV4 472 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 C5orf60A6NFR6 353 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms