RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 TOE1Q96GM8 510 aaKnown RBP13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 LRIG1Q96JA1 1093 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 FCRL5Q96RD9 977 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 MLPHQ9BV36 600 aaPredicted RBP13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 OSBPL1AQ9BXW6 950 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 RNF14Q9UBS8 474 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 GGT7Q9UJ14 662 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 NCKAP1Q9Y2A7 1128 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 PCDHB9Q9Y5E1 797 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 R4GN57 208 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 SPINT1O43278 529 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 HTRA2O43464 458 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 OPHN1O60890 802 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 PGLSO95336 258 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 CPP00450 1065 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 PRLP01236 227 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 KRT14P02533 472 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 TUBB4AP04350 444 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 C7P10643 843 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 ADRB3P13945 408 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 CES1P23141 567 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 NEK3P51956 506 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 WNT3AP56704 352 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 TAS2R38P59533 333 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 GALNT3Q14435 633 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 USP39Q53GS9 565 aaKnown RBP13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 RALGPS1Q5JS13 557 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 CFAP58Q5T655 872 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 ITPRIPL1Q6GPH6 555 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 FBXL19Q6PCT2 694 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 TTC7BQ86TV6 843 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 CCDC89Q8N998 374 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 LPCAT1Q8NF37 534 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 IPMKQ8NFU5 416 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 OR14C36Q8NHC7 312 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 NELL1Q92832 810 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 ECHDC3Q96DC8 303 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 PPP1R16AQ96I34 528 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 ZNF641Q96N77 438 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 KRT12Q99456 494 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 APOL2Q9BQE5 337 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 TDRD1Q9BXT4 1180 aaKnown RBP13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 ETNK1Q9HBU6 452 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 HAUS2Q9NVX0 235 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 ZSCAN32Q9NX65 697 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 FAM153AQ9UHL3 310 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 SCML1Q9UN30 329 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 MRFAP1Q9Y605 127 aa13.37□□□□□ -0.27
PDLIM7-212ENST00000504380 SPTBN4Q9H254 2564 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 TSPAN11A1L157 253 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 GOLGA8CPA6NN73 597 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 ZNF500O60304 480 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 ZNF217O75362 1048 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 AGTP01019 485 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 ALPIP09923 528 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 XPAP23025 273 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 CD6P30203 668 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 PTGIRP43119 386 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 CHRNA4P43681 627 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 PRPSAP1Q14558 356 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 GRM3Q14832 879 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 PARP6Q2NL67 630 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 P3H1Q32P28 736 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 ZNF528Q3MIS6 628 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 ARMC12Q5T9G4 340 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 USP30Q70CQ3 517 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 SLC25A41Q8N5S1 370 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 SPATA4Q8NEY3 305 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 PIH1D2Q8WWB5 315 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 MRGPRX2Q96LB1 330 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 FICDQ9BVA6 458 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 GPR174Q9BXC1 333 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 HDAC8Q9BY41 377 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 BTBD1Q9H0C5 482 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 C6orf106Q9H6K1 298 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 PCDH9Q9HC56 1237 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 PCDH12Q9NPG4 1184 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 WSB2Q9NYS7 404 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 DKK3Q9UBP4 350 aa13.36□□□□□ -0.27
PDLIM7-212ENST00000504380 PTPRZ1P23471 2315 aaPredicted RBP13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 CCDC163A0A0D9SF12 145 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 UPK3BL1B0FP48 263 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 UPK3BL2E5RIL1 263 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 MAP3K13O43283 966 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 FZD6O60353 706 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 SOCS5O75159 536 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 USP12O75317 370 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 RPP40O75818 363 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 IGLV3-19P01714 112 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 PIRTP0C851 137 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 FNTAP49354 379 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 ADPRHP54922 357 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 GEMP55040 296 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 FAM193AP78312 1265 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 CDK18Q07002 472 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 LPAL2Q16609 132 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 QPCTQ16769 361 aa13.35□□□□□ -0.27
PDLIM7-212ENST00000504380 UGP2Q16851 508 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms