RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 RNF31Q96EP0 1072 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 C2orf49Q9BVC5 232 aaPredicted RBP12.67□□□□□ -0.38
LSM6-204ENST00000504181 C1QTNF7Q9BXJ2 289 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 KBTBD4Q9NVX7 518 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 VANGL2Q9ULK5 521 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 RPS6KL1Q9Y6S9 549 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 TMEM110-MUSTN1A8MSY1 372 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 RHPN2P1A8MT19 583 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 KRT86O43790 486 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 ZNF821O75541 412 aaPredicted RBP12.66□□□□□ -0.38
LSM6-204ENST00000504181 HTR1BP28222 390 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 GKP32189 559 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 CSF2RBP32927 897 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 DLSTP36957 453 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 PEX5P50542 639 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 CEACAM20Q6UY09 585 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 UNC13DQ70J99 1090 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 BRAPQ7Z569 592 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 SLC9A9Q8IVB4 645 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 Q8NA96 180 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 OR4D9Q8NGE8 314 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 SEMA4DQ92854 862 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 C19orf60Q96EN9 201 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 EEF2KMTQ96G04 330 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 ZMYND15Q9H091 742 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 TRIT1Q9H3H1 467 aaKnown RBP12.66□□□□□ -0.38
LSM6-204ENST00000504181 RUBCNLQ9H714 662 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 APMAPQ9HDC9 416 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 SLAMF7Q9NQ25 335 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 SLC12A6Q9UHW9 1150 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 COQ6Q9Y2Z9 468 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 TMEM184BQ9Y519 407 aaPredicted RBP12.66□□□□□ -0.38
LSM6-204ENST00000504181 OR1A2Q9Y585 309 aa12.66□□□□□ -0.38
LSM6-204ENST00000504181 A6NCN8 305 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 O00370 1275 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 CBX6O95503 412 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 NR3C1P04150 777 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 RHOCP08134 193 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 HOXB4P17483 251 aaPredicted RBP12.65□□□□□ -0.38
LSM6-204ENST00000504181 PITX1P78337 314 aaPredicted RBP12.65□□□□□ -0.38
LSM6-204ENST00000504181 CEBPZQ03701 1054 aaKnown RBP12.65□□□□□ -0.38
LSM6-204ENST00000504181 DPYDQ12882 1025 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 CLPPQ16740 277 aaPredicted RBP12.65□□□□□ -0.38
LSM6-204ENST00000504181 JMJD6Q6NYC1 403 aaPredicted RBP12.65□□□□□ -0.38
LSM6-204ENST00000504181 FOXR2Q6PJQ5 311 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 ZNF438Q7Z4V0 828 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 CCL4L1Q8NHW4 92 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 CXorf40AQ8TE69 158 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 SLC35F5Q8WV83 523 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 WDR92Q96MX6 357 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 APOOQ9BUR5 198 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 SLC25A23Q9BV35 468 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 TWSG1Q9GZX9 223 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 MRPL40Q9NQ50 206 aaKnown RBP12.65□□□□□ -0.38
LSM6-204ENST00000504181 TBC1D30Q9Y2I9 924 aa12.65□□□□□ -0.38
LSM6-204ENST00000504181 SYNJ2BP-COX16A0A087WUM0 186 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 PRSS44E7EML9 344 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 INPP4BO15327 924 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 KATNA1O75449 491 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 CLDN11O75508 207 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 FBXO21O94952 628 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 ADCY5O95622 1261 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 DLGAP3O95886 979 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 TRUB2O95900 331 aaKnown RBP12.64□□□□□ -0.39
LSM6-204ENST00000504181 VDRP11473 427 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 NOP2P46087 812 aaKnown RBP12.64□□□□□ -0.39
LSM6-204ENST00000504181 AMPD3Q01432 767 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 SEMA5AQ13591 1074 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 AUHQ13825 339 aaKnown RBP12.64□□□□□ -0.39
LSM6-204ENST00000504181 NR1D2Q14995 579 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 E2F4Q16254 413 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 CARD16Q5EG05 197 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 IRF2BP1Q8IU81 584 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 APLFQ8IW19 511 aaPredicted RBP12.64□□□□□ -0.39
LSM6-204ENST00000504181 ESX1Q8N693 406 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 OR6K2Q8NGY2 324 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 KIAA1524Q8TCG1 905 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 OR1E3Q8WZA6 343 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 WRAP53Q9BUR4 548 aaKnown RBP12.64□□□□□ -0.39
LSM6-204ENST00000504181 TMEM168Q9H0V1 697 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 BLZF1Q9H2G9 400 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 COX16Q9P0S2 106 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 METRNQ9UJH8 293 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 CROTQ9UKG9 612 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 FRMD4BQ9Y2L6 1034 aa12.64□□□□□ -0.39
LSM6-204ENST00000504181 POLEQ07864 2286 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 A0A0D9SEW6 157 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 A8MU76 341 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 M0QYV0 167 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 ZW10O43264 779 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 IGLV3-25P01717 112 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 ITIH2P19823 946 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 MAN1A1P33908 653 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 MC2RQ01718 297 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 CHAF1BQ13112 559 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 BIRC2Q13490 618 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 INPP5AQ14642 412 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 LRRC14Q15048 493 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 ZNF805Q5CZA5 627 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 SNAP47Q5SQN1 464 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms