RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 MFSD1Q9H3U5 465 aa20.58■□□□□ 0.88
CDC42SE2-206ENST00000503291 CD248Q9HCU0 757 aa20.58■□□□□ 0.88
CDC42SE2-206ENST00000503291 SMAPO00193 183 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 FZD6O60353 706 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 IL1BP01584 269 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 CHRNA4P43681 627 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 TNNT3P45378 269 aaPredicted RBP20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 CAV1Q03135 178 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 HLTFQ14527 1009 aaKnown RBP eCLIP20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 CRY1Q16526 586 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 ARMC12Q5T9G4 340 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 PAF1Q8N7H5 531 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 MCUQ8NE86 351 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 OR52K1Q8NGK4 314 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 OR2T3Q8NH03 318 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 PIP4K2CQ8TBX8 421 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 ECHDC3Q96DC8 303 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 RSPH9Q9H1X1 276 aaPredicted RBP20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 ZDHHC18Q9NUE0 388 aa20.57■□□□□ 0.88
CDC42SE2-206ENST00000503291 PGLSO95336 258 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 PDGFBP01127 241 aaPredicted RBP20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 COPAP53621 1224 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 SARNPP82979 210 aaKnown RBP20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 SLC1A5Q15758 541 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 POM121L1PQ3SYA9 428 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 ZNF534Q76KX8 674 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 SLC25A41Q8N5S1 370 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 NEUROG2Q9H2A3 272 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 PIH1D1Q9NWS0 290 aaKnown RBP20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 RNASEH1O60930 286 aaKnown RBP20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 ATG13O75143 517 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 NDST3O95803 873 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 SATB1Q01826 763 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 GALNT3Q14435 633 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 ZNF805Q5CZA5 627 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 SIRPB2Q5JXA9 342 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 DENND5AQ6IQ26 1287 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 PPP1R21Q6ZMI0 780 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 SYT13Q7L8C5 426 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 CAND1Q86VP6 1230 aaKnown RBP20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 ZSWIM9Q86XI8 627 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 RUBCNQ92622 972 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 PWWP2AQ96N64 755 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 SERPINB12Q96P63 405 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 ADGRE3Q9BY15 652 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 MKRN2Q9H000 416 aaKnown RBP20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 NFU1Q9UMS0 254 aa20.56■□□□□ 0.88
CDC42SE2-206ENST00000503291 KPNA3O00505 521 aaPredicted RBP20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 CTIFO43310 598 aaKnown RBP20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 AVILO75366 819 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 DCNP07585 359 aaKnown RBP20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 ATXN1LP0C7T5 689 aaKnown RBP20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 ALADP13716 330 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 ECHS1P30084 290 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 MTM1Q13496 603 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 ELF2Q15723 593 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 CFAP58Q5T655 872 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 LRRC8BQ6P9F7 803 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 DNAAF3Q8N9W5 541 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 LPCAT1Q8NF37 534 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 PIH1D2Q8WWB5 315 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 RMDN1Q96DB5 314 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 PARD6BQ9BYG5 372 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 ARNT2Q9HBZ2 717 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 CASS4Q9NQ75 786 aa20.55■□□□□ 0.88
CDC42SE2-206ENST00000503291 ANKRD66B4E2M5 251 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 HLA-DPA1P20036 260 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 RPS9P46781 194 aaKnown RBP20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 METAP1P53582 386 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 WDR93Q6P2C0 686 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 TMPRSS6Q8IU80 811 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 CHRDQ9H2X0 955 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 FBRSQ9HAH7 460 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 C2orf42Q9NWW7 574 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 C1QTNF3-AMACRE9PGA6 284 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 SLC8A1P32418 973 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 PSMD8P48556 350 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 EPHB1P54762 984 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 VSNL1P62760 191 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 CDH17Q12864 832 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 CST6Q15828 149 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 FAM46CQ5VWP2 391 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 BRAT1Q6PJG6 821 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 CACUL1Q86Y37 369 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 ZCCHC9Q8N567 271 aaKnown RBP20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 HCAR2Q8TDS4 363 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 SPOCK2Q92563 424 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 FAM129AQ9BZQ8 928 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 XAB2Q9HCS7 855 aaKnown RBP20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 DKK3Q9UBP4 350 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 TECTAO75443 2155 aa20.54■□□□□ 0.88
CDC42SE2-206ENST00000503291 A0A1W2PQ67 120 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 C16orf96A6NNT2 1141 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 MLNP12872 115 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 TPH1P17752 444 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 RPL26P61254 145 aaKnown RBP20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 RPS14P62263 151 aaKnown RBP20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 FNBP1LQ5T0N5 605 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 ZNF776Q68DI1 518 aaPredicted RBP20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 CWF19L1Q69YN2 538 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms