RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 KLF11O14901 512 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 BIRC5O15392 142 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 LDB2O43679 373 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 AHSGP02765 367 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 GSTA1P08263 222 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 NEFHP12036 1026 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 GALNT3Q14435 633 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 RETSATQ6NUM9 610 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 LINGO4Q6UY18 593 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 LMNTD2Q8IXW0 634 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 OR13J1Q8NGT2 312 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 ACDQ96AP0 544 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 ATXN7L3BQ96GX2 97 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 PLCD4Q9BRC7 762 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 TDRD1Q9BXT4 1180 aaKnown RBP22.17■■□□□ 1.14
PTPN13-205ENST00000502971 SMG9Q9H0W8 520 aaKnown RBP22.17■■□□□ 1.14
PTPN13-205ENST00000502971 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.17■■□□□ 1.14
PTPN13-205ENST00000502971 SLC1A2P43004 574 aa22.16■■□□□ 1.14
PTPN13-205ENST00000502971 IFT88Q13099 833 aa22.16■■□□□ 1.14
PTPN13-205ENST00000502971 CGB2Q6NT52 195 aa22.16■■□□□ 1.14
PTPN13-205ENST00000502971 ELMSAN1Q6PJG2 1045 aa22.16■■□□□ 1.14
PTPN13-205ENST00000502971 RAB3IL1Q8TBN0 382 aa22.16■■□□□ 1.14
PTPN13-205ENST00000502971 EXOC2Q96KP1 924 aa22.16■■□□□ 1.14
PTPN13-205ENST00000502971 MFSD1Q9H3U5 465 aa22.16■■□□□ 1.14
PTPN13-205ENST00000502971 SLCO1B3Q9NPD5 702 aa22.16■■□□□ 1.14
PTPN13-205ENST00000502971 LHX3Q9UBR4 397 aa22.16■■□□□ 1.14
PTPN13-205ENST00000502971 GGT7Q9UJ14 662 aa22.16■■□□□ 1.14
PTPN13-205ENST00000502971 CXorf51AA0A1B0GTR3 108 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 KIAA0754O94854 1291 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 GABRB3P28472 473 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 ACVR1Q04771 509 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 CTBP1Q13363 440 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 GPM6BQ13491 265 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 GRM3Q14832 879 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 PRSS36Q5K4E3 855 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 ZNF470Q6ECI4 717 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 NCEH1Q6PIU2 408 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 TPGS1Q6ZTW0 290 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 CMC1Q7Z7K0 106 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 GALNT7Q86SF2 657 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 DENND6AQ8IWF6 608 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 BLOC1S5Q8TDH9 187 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 BHMTQ93088 406 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 NSMCE3Q96MG7 304 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 TDP1Q9NUW8 608 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 FBXO5Q9UKT4 447 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 CCL26Q9Y258 94 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 CHKBQ9Y259 395 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 ARL2BPQ9Y2Y0 163 aa22.15■■□□□ 1.14
PTPN13-205ENST00000502971 A0A096LPK6 155 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 IL1BP01584 269 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 PBX2P40425 430 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 CSRP3P50461 194 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 PLK1P53350 603 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 RHOAP61586 193 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 MPP1Q00013 466 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 SLC12A1Q13621 1099 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 SLC5A9Q2M3M2 681 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 PPM1JQ5JR12 505 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 N4BP2L1Q5TBK1 243 aaPredicted RBP22.14■■□□□ 1.14
PTPN13-205ENST00000502971 METTL3Q86U44 580 aaKnown RBP22.14■■□□□ 1.14
PTPN13-205ENST00000502971 APCDD1Q8J025 514 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 USP13Q92995 863 aaPredicted RBP22.14■■□□□ 1.14
PTPN13-205ENST00000502971 SLC28A3Q9HAS3 691 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 SIRPGQ9P1W8 387 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 ANKRD6Q9Y2G4 727 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 RAI2Q9Y5P3 530 aa22.14■■□□□ 1.14
PTPN13-205ENST00000502971 ZNF197O14709 1029 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 CRTAMO95727 393 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 BPGMP07738 259 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 BGNP21810 368 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 CD151P48509 253 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 PRAMEP78395 509 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 ILF2Q12905 390 aaKnown RBP22.14■■□□□ 1.13
PTPN13-205ENST00000502971 LMAN2Q12907 356 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 PPP2R2DQ66LE6 453 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 ATG16L1Q676U5 607 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 OTOAQ7RTW8 1153 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 LCA5Q86VQ0 697 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 RNF135Q8IUD6 432 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 NUDCD3Q8IVD9 361 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 STYXQ8WUJ0 223 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 ADGRE3Q9BY15 652 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 PRO3102Q9H379 93 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 EMCNQ9ULC0 261 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 SLC39A10Q9ULF5 831 aa22.14■■□□□ 1.13
PTPN13-205ENST00000502971 PLIN3O60664 434 aa22.13■■□□□ 1.13
PTPN13-205ENST00000502971 PRLP01236 227 aa22.13■■□□□ 1.13
PTPN13-205ENST00000502971 C2P06681 752 aa22.13■■□□□ 1.13
PTPN13-205ENST00000502971 F7P08709 466 aaPredicted RBP22.13■■□□□ 1.13
PTPN13-205ENST00000502971 ABCG1P45844 678 aa22.13■■□□□ 1.13
PTPN13-205ENST00000502971 LEPRP48357 1165 aaKnown RBP22.13■■□□□ 1.13
PTPN13-205ENST00000502971 SLC20A2Q08357 652 aa22.13■■□□□ 1.13
PTPN13-205ENST00000502971 CCDC153Q494R4 210 aa22.13■■□□□ 1.13
PTPN13-205ENST00000502971 CLEC14AQ86T13 490 aa22.13■■□□□ 1.13
PTPN13-205ENST00000502971 RMDN1Q96DB5 314 aa22.13■■□□□ 1.13
PTPN13-205ENST00000502971 TSSK1BQ9BXA7 367 aa22.13■■□□□ 1.13
PTPN13-205ENST00000502971 CAB39LQ9H9S4 337 aa22.13■■□□□ 1.13
PTPN13-205ENST00000502971 PLK2Q9NYY3 685 aa22.13■■□□□ 1.13
PTPN13-205ENST00000502971 TOP3BO95985 862 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms