RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 AP2S1P53680 142 aaPredicted RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 PTRHD1Q6GMV3 140 aaKnown RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 MACC1Q6ZN28 852 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 SMIM5Q71RC9 77 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF720Q7Z2F6 126 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 KCTD20Q7Z5Y7 419 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 P2RY8Q86VZ1 359 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 NAT9Q9BTE0 207 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 RIMKLBQ9ULI2 386 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 ACTL7BQ9Y614 415 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 IRAK3Q9Y616 596 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 PGRMC2O15173 223 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 CD3EAPO15446 510 aaKnown RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 GYPCP04921 128 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 VLDLRP98155 873 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 LRRC41Q15345 812 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 GSTCDQ8NEC7 633 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 ADAM32Q8TC27 787 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 TCP10LQ8TDR4 215 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 ICKQ9UPZ9 632 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 PCDHB3Q9Y5E6 796 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 FAM95CA0A1B0GW59 222 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 UBXN8O00124 270 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 CLDN3O15551 220 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 ANXA5P08758 320 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 DRG2P55039 364 aaKnown RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 CSTF1Q05048 431 aaKnown RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 SF3B4Q15427 424 aaKnown RBP eCLIP4.81□□□□□ -1.644e-19■■□□□ 13.4
NEAT1-202ENST00000501122 PLEKHG7Q6ZR37 379 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 OTOP3Q7RTS5 596 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 LACC1Q8IV20 430 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 SLITRK4Q8IW52 837 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 XAGE2Q96GT9 111 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 AGAP2Q99490 1192 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 ZCCHC2Q9C0B9 1178 aaKnown RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 CREBZFQ9NS37 354 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 FAM237BA0A1B0GVD1 139 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 SLC30A4O14863 429 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 UBDO15205 165 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 SOX30O94993 753 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 HERC6Q8IVU3 1022 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 SMG8Q8ND04 991 aaKnown RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 DSCC1Q9BVC3 393 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 MMP27Q9H306 513 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 C12orf65Q9H3J6 166 aaKnown RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 CYB5R1Q9UHQ9 305 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 DAGLAQ9Y4D2 1042 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 POU4F3Q15319 338 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 IGFN1Q86VF2 1251 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 COQ10BQ9H8M1 238 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 SULT1C2O00338 296 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 FOXN1O15353 648 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 SERPINE1P05121 402 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 IMPDH1P20839 514 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 NR2F2P24468 414 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 ARHGAP40Q5TG30 622 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 IL23RQ5VWK5 629 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 DSG4Q86SJ6 1040 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 HIPK1Q86Z02 1210 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 ATP6V0D2Q8N8Y2 350 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 NT5C1BQ96P26 610 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF282Q9UDV7 671 aaPredicted RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 EIF3LQ9Y262 564 aaKnown RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 ASCC3Q8N3C0 2202 aaKnown RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 A0A1W2PQJ5 194 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 POLRMTO00411 1230 aaKnown RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 LACRTQ9GZZ8 138 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 EPB41L4BQ9H329 900 aa4.81□□□□□ -1.64
NEAT1-202ENST00000501122 NXF1Q9UBU9 619 aaKnown RBP4.81□□□□□ -1.64
NEAT1-202ENST00000501122 F8W036 122 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 RPS6KA4O75676 772 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 TGFB3P10600 412 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 CDH6P55285 790 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 STILQ15468 1287 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 RFX4Q33E94 735 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 NUDT18Q6ZVK8 323 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 USP44Q9H0E7 712 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 TRIM36Q9NQ86 728 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 CNOT8Q9UFF9 292 aaKnown RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 MYL12BO14950 172 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 LDOC1O95751 146 aaPredicted RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 CNTFP26441 200 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ACSBG2Q5FVE4 666 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SSX7Q7RTT5 188 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SYN2Q92777 582 aaPredicted RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 AP2M1Q96CW1 435 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 TBCBQ99426 244 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 FAM83DQ9H4H8 585 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SEMA3GQ9NS98 782 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 BLOC1S4Q9NUP1 217 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 TFR2Q9UP52 801 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SPDYE2BA6NHP3 402 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 OR6B1O95007 311 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SPDYE6P0CI01 402 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 PEX2P28328 305 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 TFDP2Q14188 446 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SYT16Q17RD7 645 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 USP39Q53GS9 565 aaKnown RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 MTSS1LQ765P7 747 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 OR10T2Q8NGX3 314 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms