RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 FBXL12Q9NXK8 326 aa5.69□□□□□ -1.5
SPTA1-209ENST00000498708 SUN2Q9UH99 717 aa5.69□□□□□ -1.5
SPTA1-209ENST00000498708 HBS1LQ9Y450 684 aaKnown RBP5.69□□□□□ -1.5
SPTA1-209ENST00000498708 CEP83Q9Y592 693 aa5.69□□□□□ -1.5
SPTA1-209ENST00000498708 PCDHB4Q9Y5E5 795 aa5.69□□□□□ -1.5
SPTA1-209ENST00000498708 SYNJ2BP-COX16A0A087WUM0 186 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TBC1D3DA0A087WVF3 549 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TBC1D3IA0A087WXS9 549 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TBC1D3EA0A087X179 549 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TBC1D3KA0A087X1G2 549 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TRIM49BA6NDI0 452 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TBC1D3FA6NER0 549 aaPredicted RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TBC1D3LB9A6J9 549 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 M0QYV0 167 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 CETN3O15182 167 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 MAPK13O15264 365 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 RNASEH1O60930 286 aaKnown RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 RHOBTB3O94955 611 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 ATP5BP06576 529 aaKnown RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 GP1BAP07359 652 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 DLDP09622 509 aaKnown RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TBC1D3HP0C7X1 549 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 EPB41P11171 864 aaKnown RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 VDRP11473 427 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 HGFP14210 728 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 CMA1P23946 247 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 MAT2AP31153 395 aaKnown RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 SLC8A1P32418 973 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 CSKP41240 450 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 SLC11A2P49281 568 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 PDX1P52945 283 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 METAP1P53582 386 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 DAOAP59103 153 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 RPS24P62847 133 aaKnown RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 BST2Q10589 180 aaKnown RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 PNOCQ13519 176 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 CUL2Q13617 745 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 E2F5Q15329 346 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 POM121L1PQ3SYA9 428 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 FAM133BQ5BKY9 247 aaKnown RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 FSCBQ5H9T9 825 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 ADGRF1Q5T601 910 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 PIK3R6Q5UE93 754 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 RAP1GAP2Q684P5 730 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TBC1D3GQ6DHY5 549 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 PM20D1Q6GTS8 502 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 ISM2Q6H9L7 571 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 NADSYN1Q6IA69 706 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TBC1D3CQ6IPX1 549 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 PMF1Q6P1K2 205 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TMEM270Q6UE05 265 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 KRBA2Q6ZNG9 492 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 RBM44Q6ZP01 1051 aaKnown RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 ZFAND4Q86XD8 727 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 CCDC117Q8IWD4 279 aaPredicted RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 FAM217AQ8IXS0 508 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TBC1D3Q8IZP1 549 aaPredicted RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 STK40Q8N2I9 435 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 GUF1Q8N442 669 aaKnown RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 MFSD2AQ8NA29 543 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 OR14C36Q8NHC7 312 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 TFAP2BQ92481 460 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 ERCC4Q92889 916 aaPredicted RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 KAT5Q92993 513 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 MOCOSQ96EN8 888 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 MRGPRX3Q96LB0 322 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 PRICKLE1Q96MT3 831 aaPredicted RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 MYOCQ99972 504 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 SLC12A9Q9BXP2 914 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 UBXN6Q9BZV1 441 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 GOLPH3LQ9H4A5 285 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 ST7Q9NRC1 585 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 DONSONQ9NYP3 566 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 COX16Q9P0S2 106 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 XPO7Q9UIA9 1087 aaKnown RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 SLCO3A1Q9UIG8 710 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 INTS6Q9UL03 887 aaKnown RBP5.68□□□□□ -1.5
SPTA1-209ENST00000498708 ERVW-1Q9UQF0 538 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 HPSEQ9Y251 543 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 CA5BQ9Y2D0 317 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 PCDHGA7Q9Y5G6 932 aa5.68□□□□□ -1.5
SPTA1-209ENST00000498708 SHANK1Q9Y566 2161 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 CCDC168Q8NDH2 2452 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 DCHS2Q6V1P9 2916 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 CCDC187A0A096LP49 1063 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 FAM170AA1A519 330 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 TYW5A2RUC4 315 aaKnown RBP5.67□□□□□ -1.5
SPTA1-209ENST00000498708 CPED1A4D0V7 1026 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 LRRC72A6NJI9 287 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 O00370 1275 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 STX10O60499 249 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 NEBLO76041 1014 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 IL1BP01584 269 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 LTFP02788 710 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 LIPCP11150 499 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 VAV1P15498 845 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 NR1D1P20393 614 aa5.67□□□□□ -1.5
SPTA1-209ENST00000498708 GTF2H1P32780 548 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms