RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CDCA5Q96FF9 252 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 WDYHV1Q96HA8 205 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 CNDP1Q96KN2 507 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 HS6ST2Q96MM7 605 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 RUFY1Q96T51 708 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 SH3GL2Q99962 352 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 H2AFJQ9BTM1 129 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 ASAH2Q9NR71 780 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 POLE3Q9NRF9 147 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 SLC6A13Q9NSD5 602 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 SEPT10Q9P0V9 454 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 CNOT8Q9UFF9 292 aaKnown RBP6.23□□□□□ -1.41
BRCA1-224ENST00000497488 KIF14Q15058 1648 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 CASKIN1Q8WXD9 1431 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 A0A087WV48 116 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 EDDM13A0A1B0GTR0 161 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 UBE2QL1A1L167 161 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 SMIM30A4D0T7 59 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 OR14I1A6ND48 311 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 TCAF2A6NFQ2 919 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 OOEPA6NGQ2 149 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 MCF2LO15068 1137 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 CCNT1O60563 726 aaKnown RBP6.22□□□□□ -1.41
BRCA1-224ENST00000497488 RAD17O75943 681 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 ALPPP05187 535 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 ALPPL2P10696 532 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 ATF2P15336 505 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 PDGFRAP16234 1089 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 POU1F1P28069 291 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 HOXA10P31260 410 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-224ENST00000497488 IGHMBP2P38935 993 aaKnown RBP6.22□□□□□ -1.41
BRCA1-224ENST00000497488 PSMC4P43686 418 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 NDUFV1P49821 464 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 HNMTP50135 292 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 FAM189BP81408 668 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 OLIG2Q13516 323 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 RRS1Q15050 365 aaKnown RBP6.22□□□□□ -1.41
BRCA1-224ENST00000497488 PGM5Q15124 567 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 SHROOM1Q2M3G4 852 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-224ENST00000497488 PCGF3Q3KNV8 242 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 MAJINQ3KP22 176 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 FBXO43Q4G163 708 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 HEPHL1Q6MZM0 1159 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 SLC23A3Q6PIS1 610 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 ISLR2Q6UXK2 745 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 RGS9BPQ6ZS82 235 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 PLEKHM3Q6ZWE6 761 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 FAM160B2Q86V87 743 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 ZDHHC13Q8IUH4 622 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 KLHL7Q8IXQ5 586 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 VPS52Q8N1B4 723 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 MIGA1Q8NAN2 632 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 RBM15BQ8NDT2 890 aaKnown RBP6.22□□□□□ -1.41
BRCA1-224ENST00000497488 SETD9Q8NE22 299 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 OR52L2PQ8NGH6 319 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 BCAS4Q8TDM0 211 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 C2CD4CQ8TF44 421 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 SLC13A3Q8WWT9 602 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 RABGGTAQ92696 567 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 ARHGEF26Q96DR7 871 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 ARSGQ96EG1 525 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 VPS50Q96JG6 964 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 CAMK1GQ96NX5 476 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 GAL3ST4Q96RP7 486 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 PNKPQ96T60 521 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 TXN2Q99757 166 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 IFIH1Q9BYX4 1025 aaKnown RBP6.22□□□□□ -1.41
BRCA1-224ENST00000497488 NYXQ9GZU5 481 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 CDCP1Q9H5V8 836 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 RANGRFQ9HD47 186 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-224ENST00000497488 PAPOLBQ9NRJ5 636 aaKnown RBP6.22□□□□□ -1.41
BRCA1-224ENST00000497488 IARS2Q9NSE4 1012 aaKnown RBP6.22□□□□□ -1.41
BRCA1-224ENST00000497488 OLAHQ9NV23 265 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 BABAM1Q9NWV8 329 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 HAO2Q9NYQ3 351 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 PLK2Q9NYY3 685 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 HSFX1Q9UBD0 423 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 TSPYL4Q9UJ04 414 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 SLC5A6Q9Y289 635 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 FYCO1Q9BQS8 1478 aa6.22□□□□□ -1.41
BRCA1-224ENST00000497488 A0A1W2PR77 199 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 CLRN2A0PK11 232 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 PRR5-ARHGAP8B1AHC4 643 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 USP17L23D6RBM5 183 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 ZC3H11AO75152 810 aaKnown RBP eCLIP6.21□□□□□ -1.42
BRCA1-224ENST00000497488 SLC25A12O75746 678 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 LETM1O95202 739 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-224ENST00000497488 VNN1O95497 513 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 GBAP04062 536 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 HLA-DOAP06340 250 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 HEXAP06865 529 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 ZNF888P0CJ79 500 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-224ENST00000497488 UROSP10746 265 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 MMP9P14780 707 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 CDAP32320 146 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 SKIV2L2P42285 1042 aaKnown RBP6.21□□□□□ -1.42
BRCA1-224ENST00000497488 GATA4P43694 442 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 GABRB2P47870 512 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 SUOXP51687 545 aa6.21□□□□□ -1.42
BRCA1-224ENST00000497488 CHN2P52757 468 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms