RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 IRF4Q15306 451 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 PRRT3Q5FWE3 981 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 PPP6R3Q5H9R7 873 aaPredicted RBP13.08□□□□□ -0.32
FN1-226ENST00000496542 ERMARDQ5T6L9 678 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 CDCP2Q5VXM1 449 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 LRRC69Q6ZNQ3 347 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 ZNF571Q7Z3V5 609 aaPredicted RBP13.08□□□□□ -0.32
FN1-226ENST00000496542 PHACTR4Q8IZ21 702 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 ARFGAP1Q8N6T3 406 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 TP53I13Q8NBR0 393 aaPredicted RBP13.08□□□□□ -0.32
FN1-226ENST00000496542 BTN2A2Q8WVV5 523 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 ZNF653Q96CK0 615 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 DEPDC7Q96QD5 511 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 IL12RB2Q99665 862 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 BPIFA3Q9BQP9 254 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 CPEB1Q9BZB8 566 aaKnown RBP13.08□□□□□ -0.32
FN1-226ENST00000496542 SLC13A1Q9BZW2 595 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 SLC39A8Q9C0K1 460 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 SUV39H2Q9H5I1 410 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 PCDH12Q9NPG4 1184 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 SPASTQ9UBP0 616 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 CNOT8Q9UFF9 292 aaKnown RBP13.08□□□□□ -0.32
FN1-226ENST00000496542 TSPAN11A1L157 253 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 TMEM191CA6NGB0 347 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 DFFAO00273 331 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 RRP8O43159 456 aaKnown RBP13.07□□□□□ -0.32
FN1-226ENST00000496542 PRPSAP2O60256 369 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 CSO75390 466 aaKnown RBP13.07□□□□□ -0.32
FN1-226ENST00000496542 GCATO75600 419 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 RNF8O76064 485 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 FTLP02792 175 aaPredicted RBP13.07□□□□□ -0.32
FN1-226ENST00000496542 PRKCGP05129 697 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 MIPP30301 263 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 EIF4A3P38919 411 aaKnown RBP13.07□□□□□ -0.32
FN1-226ENST00000496542 EIF2S3P41091 472 aaKnown RBP13.07□□□□□ -0.32
FN1-226ENST00000496542 RGRP47804 291 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 SUOXP51687 545 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 ADKP55263 362 aaKnown RBP13.07□□□□□ -0.32
FN1-226ENST00000496542 YPEL5P62699 121 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 KLHL30Q0D2K2 578 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 GRM3Q14832 879 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 NR0B2Q15466 257 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 TCEA2Q15560 299 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 TMEM52BQ4KMG9 183 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 SOWAHCQ53LP3 525 aaPredicted RBP13.07□□□□□ -0.32
FN1-226ENST00000496542 FAXCQ5TGI0 409 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 CAVIN1Q6NZI2 390 aaKnown RBP13.07□□□□□ -0.32
FN1-226ENST00000496542 ERAP2Q6P179 960 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 GUSBP11Q6P575 273 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 MACC1Q6ZN28 852 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 RFX8Q6ZV50 586 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 EFL1Q7Z2Z2 1120 aaKnown RBP13.07□□□□□ -0.32
FN1-226ENST00000496542 CAMK1DQ8IU85 385 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 PAF1Q8N7H5 531 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 SNIP1Q8TAD8 396 aaKnown RBP13.07□□□□□ -0.32
FN1-226ENST00000496542 LRRC61Q9BV99 259 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 SP110Q9HB58 689 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 NCKIPSDQ9NZQ3 722 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 PNMA8BQ9ULN7 279 aaPredicted RBP13.07□□□□□ -0.32
FN1-226ENST00000496542 SHROOM3Q8TF72 1996 aa13.07□□□□□ -0.32
FN1-226ENST00000496542 A0A1W2PQC6 194 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 EIF3CLB5ME19 914 aaKnown RBP13.06□□□□□ -0.32
FN1-226ENST00000496542 DDX3XO00571 662 aaKnown RBP eCLIP13.06□□□□□ -0.32
FN1-226ENST00000496542 MUSKO15146 869 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 BUB1BO60566 1050 aaPredicted RBP13.06□□□□□ -0.32
FN1-226ENST00000496542 PALMO75781 387 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 MPOP05164 745 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 ANXA6P08133 673 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 SKILP12757 684 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 C6P13671 934 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 ERCC2P18074 760 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 ACTN2P35609 894 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 MMP12P39900 470 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 ZNF165P49910 485 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 PPARDQ03181 441 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 CCDC173Q0VFZ6 552 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 LRRC14Q15048 493 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 UGP2Q16851 508 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 WSCD2Q2TBF2 565 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 TBC1D25Q3MII6 688 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 BRAT1Q6PJG6 821 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 CRTC1Q6UUV9 634 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 ARHGAP36Q6ZRI8 547 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 CYP4V2Q6ZWL3 525 aaPredicted RBP13.06□□□□□ -0.32
FN1-226ENST00000496542 SRLQ86TD4 932 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 ZSWIM9Q86XI8 627 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 ARHGAP12Q8IWW6 846 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 NPWQ8N729 165 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 TSEN2Q8NCE0 465 aaKnown RBP13.06□□□□□ -0.32
FN1-226ENST00000496542 HCAR2Q8TDS4 363 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 FGF11Q92914 225 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 ZNF641Q96N77 438 aaPredicted RBP13.06□□□□□ -0.32
FN1-226ENST00000496542 TUBGCP5Q96RT8 1024 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 EIF3CQ99613 913 aaKnown RBP13.06□□□□□ -0.32
FN1-226ENST00000496542 CINPQ9BW66 212 aaPredicted RBP13.06□□□□□ -0.32
FN1-226ENST00000496542 ATP13A3Q9H7F0 1226 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 AIPL1Q9NZN9 384 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 MYO1AQ9UBC5 1043 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 SALL4Q9UJQ4 1053 aa13.06□□□□□ -0.32
FN1-226ENST00000496542 ATP8A1Q9Y2Q0 1164 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms