RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 RHODO00212 210 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 TCERG1O14776 1098 aaKnown RBP3.92□□□□□ -1.78
CLK1-214ENST00000496205 SPARCP09486 303 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 HSPA1AP0DMV8 641 aaKnown RBP3.92□□□□□ -1.78
CLK1-214ENST00000496205 HSPA1BP0DMV9 641 aaKnown RBP3.92□□□□□ -1.78
CLK1-214ENST00000496205 TNFRSF8P28908 595 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 CHRNA5P30532 468 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 FMO4P31512 558 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 BSGP35613 385 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 CPOXP36551 454 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 SKIV2L2P42285 1042 aaKnown RBP3.92□□□□□ -1.78
CLK1-214ENST00000496205 CPA2P48052 419 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 PMPCAQ10713 525 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 GRIK3Q13003 919 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 PDE1CQ14123 709 aaPredicted RBP3.92□□□□□ -1.78
CLK1-214ENST00000496205 RNPS1Q15287 305 aaKnown RBP3.92□□□□□ -1.78
CLK1-214ENST00000496205 TXNDC8Q6A555 127 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 IL20RBQ6UXL0 311 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 LRIG3Q6UXM1 1119 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 CLEC17AQ6ZS10 378 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 IKBIPQ70UQ0 350 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 CYB5R4Q7L1T6 521 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 SLC46A3Q7Z3Q1 461 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 GPSM1Q86YR5 675 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 ADGRF4Q8IZF3 695 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 CADM3Q8N126 398 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 TTC39CQ8N584 583 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 CCDC89Q8N998 374 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 TMEM116Q8NCL8 245 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 ASB5Q8WWX0 329 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 ATOH1Q92858 354 aaPredicted RBP3.92□□□□□ -1.78
CLK1-214ENST00000496205 SAAL1Q96ER3 474 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 IFT27Q9BW83 186 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 NUF2Q9BZD4 464 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 TKTL2Q9H0I9 626 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 PDCL3Q9H2J4 239 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 ENTPD7Q9NQZ7 604 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 ADD3Q9UEY8 706 aaKnown RBP3.92□□□□□ -1.78
CLK1-214ENST00000496205 CDH22Q9UJ99 828 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 MAFFQ9ULX9 164 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 KCNE2Q9Y6J6 123 aa3.92□□□□□ -1.78
CLK1-214ENST00000496205 TRBV5-3A0A0A0MS03 114 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 IGLV5-39A0A0G2JS06 123 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 ARHGAP10A1A4S6 786 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 A6NNC1 897 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 NPIPB11E5RHQ5 1161 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 CCER2I3L3R5 266 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 PAGE4O60829 102 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 TIPRLO75663 272 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 SEC14L2O76054 403 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 TMCC1O94876 653 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 NGFRP08138 427 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 UNGP13051 313 aaPredicted RBP3.91□□□□□ -1.78
CLK1-214ENST00000496205 RARGP13631 454 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 CTPS1P17812 591 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 TTKP33981 857 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 RYKP34925 604 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 ACTN2P35609 894 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 DPP6P42658 865 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 BLKP51451 505 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 EIF3BP55884 814 aaKnown RBP3.91□□□□□ -1.78
CLK1-214ENST00000496205 HDAC4P56524 1084 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 NLRP5P59047 1200 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 ARF3P61204 181 aaPredicted RBP3.91□□□□□ -1.78
CLK1-214ENST00000496205 PSMC6P62333 389 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 RPL7AP62424 266 aaKnown RBP3.91□□□□□ -1.78
CLK1-214ENST00000496205 OLR1P78380 273 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 ARF1P84077 181 aaKnown RBP3.91□□□□□ -1.78
CLK1-214ENST00000496205 TMEM268Q5VZI3 342 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 CCDC129Q6ZRS4 1044 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 SZRD1Q7Z422 152 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 NOXA1Q86UR1 476 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 TDRPQ86YL5 185 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 LRRC57Q8N9N7 239 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 MPLKIPQ8TAP9 179 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 TMEM170AQ8WVE7 144 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 LMLNQ96KR4 655 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 SERINC2Q96SA4 455 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 RSF1Q96T23 1441 aaPredicted RBP3.91□□□□□ -1.78
CLK1-214ENST00000496205 PLEKHA4Q9H4M7 779 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 PRKRIP1Q9H875 184 aaPredicted RBP3.91□□□□□ -1.78
CLK1-214ENST00000496205 MRPL44Q9H9J2 332 aaKnown RBP3.91□□□□□ -1.78
CLK1-214ENST00000496205 DIAPH3Q9NSV4 1193 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 HAUS2Q9NVX0 235 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 BABAM1Q9NWV8 329 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 ABI3Q9P2A4 366 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 FBXO40Q9UH90 709 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 LIMA1Q9UHB6 759 aaKnown RBP3.91□□□□□ -1.78
CLK1-214ENST00000496205 VPS28Q9UK41 221 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 PCDHGB5Q9Y5G0 923 aa3.91□□□□□ -1.78
CLK1-214ENST00000496205 RUSC2Q8N2Y8 1516 aa3.9□□□□□ -1.78
CLK1-214ENST00000496205 KIR2DS5A0A0G2JLQ3 304 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 FAM237BA0A1B0GVD1 139 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.9□□□□□ -1.79
CLK1-214ENST00000496205 TMEM247A6NEH6 219 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 HSPB2A8KAH6 182 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 KRTAP9-6A8MVA2 160 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 KIR2DS3K7RE56 304 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 TAF4O00268 1085 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 AP3D1O14617 1153 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms