RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 ADRB3P13945 408 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 MAN1A1P33908 653 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 TXLNAP40222 546 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 PGDP52209 483 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 HK3P52790 923 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 PMS2P54278 862 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 SNRPFP62306 86 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 YPEL5P62699 121 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 ABHD18Q0P651 414 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 AMZ1Q400G9 498 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 PRR30Q53SZ7 412 aaPredicted RBP9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 FAM129CQ86XR2 697 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 MMP21Q8N119 569 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 SH2D3CQ8N5H7 860 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 GPR156Q8NFN8 814 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 NANOS1Q8WY41 292 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 KCTD13Q8WZ19 329 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 TEFMQ96QE5 360 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 OCSTAMPQ9BR26 566 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 SLAMF7Q9NQ25 335 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 RRN3Q9NYV6 651 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 LRIT1Q9P2V4 623 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 NAV3Q8IVL0 2385 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 NIPBLQ6KC79 2804 aaeCLIP9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 SPG11Q96JI7 2443 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 MED13LQ71F56 2210 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 IGLON5A6NGN9 336 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 F5H5T6 163 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 NEMP1O14524 444 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 NUDT21O43809 227 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 LRCH4O75427 683 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 RASGRP1O95267 797 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 BMP15O95972 392 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 EIF4A3P38919 411 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 NEK4P51957 841 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 PLK1P53350 603 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 TRA2AQ13595 282 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 CLPPQ16740 277 aaPredicted RBP9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 EDRF1Q3B7T1 1238 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 C14orf28Q4W4Y0 310 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 TTC39BQ5VTQ0 682 aaPredicted RBP9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 RRAGBQ5VZM2 374 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 RAP1GAP2Q684P5 730 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 ANKS6Q68DC2 871 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 SPNS3Q6ZMD2 512 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 RD3Q7Z3Z2 195 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 CCDC116Q8IYX3 515 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 CCAR2Q8N163 923 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 ANKRD52Q8NB46 1076 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 SEC16BQ96JE7 1060 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 SERPINB11Q96P15 392 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 TRIT1Q9H3H1 467 aaKnown RBP9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 FANCLQ9NW38 375 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 IL36AQ9UHA7 158 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 KCND3Q9UK17 655 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 VPS28Q9UK41 221 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 FADS3Q9Y5Q0 445 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 SHANK1Q9Y566 2161 aa9.74□□□□□ -0.85
SMARCAL1-213ENST00000496037 IGHV5-10-1A0A0J9YXX1 117 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 B4DGG1 531 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 PRSS44E7EML9 344 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 TOR1BO14657 336 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 XPO1O14980 1071 aaKnown RBP9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 TGFB1I1O43294 461 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 AP1G1O43747 822 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 APOEP02649 317 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 TACR2P21452 398 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 HOXD13P35453 343 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 IGFALSP35858 605 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 EIF1AXP47813 144 aaKnown RBP9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 PER3P56645 1201 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 ERV3-1Q14264 604 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 ZACNQ401N2 412 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 SP5Q6BEB4 398 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 CENPQQ7L2Z9 268 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 C11orf96Q7Z7L8 435 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 VPS36Q86VN1 386 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 ATP11CQ8NB49 1132 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 OR2A12Q8NGT7 310 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 PLEKHO2Q8TD55 490 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 PARD3BQ8TEW8 1205 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 ASB12Q8WXK4 309 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 ITPKCQ96DU7 683 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 EPSTI1Q96J88 318 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 FCRL2Q96LA5 508 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 KCTD15Q96SI1 283 aaPredicted RBP9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 NUDT22Q9BRQ3 303 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 C1QTNF7Q9BXJ2 289 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 NIF3L1Q9GZT8 377 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 CNGB3Q9NQW8 809 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 MRPS18BQ9Y676 258 aaKnown RBP9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 CCDC168Q8NDH2 2452 aa9.73□□□□□ -0.85
SMARCAL1-213ENST00000496037 PCSK5Q92824 1860 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 TACC2O95359 2948 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 A6NCN8 305 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 TCAF2A6NFQ2 919 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 B4E171 279 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 TULP2O00295 520 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 TSPAN6O43657 245 aa9.72□□□□□ -0.85
SMARCAL1-213ENST00000496037 FZD6O60353 706 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms