RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 CSPG4P5Q96PW8 444 aa14.39□□□□□ -0.11
RPRD1B-206ENST00000495457 CINPQ9BW66 212 aaPredicted RBP14.39□□□□□ -0.11
RPRD1B-206ENST00000495457 PCDH12Q9NPG4 1184 aa14.39□□□□□ -0.11
RPRD1B-206ENST00000495457 ZZEF1O43149 2961 aa14.39□□□□□ -0.11
RPRD1B-206ENST00000495457 CFAP47Q6ZTR5 3102 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 TRPM6Q9BX84 2022 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 TTC24A2A3L6 582 aaPredicted RBP14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 C1SP09871 688 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 NME1P15531 152 aaKnown RBP14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 ACP1P24666 158 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 ARL4AP40617 200 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 ZNF135P52742 658 aaPredicted RBP14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 HNRNPKP61978 463 aaKnown RBP eCLIP14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 SLC10A7Q0GE19 358 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 EIF2B5Q13144 721 aaKnown RBP14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 GRM3Q14832 879 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 TMEM52BQ4KMG9 183 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 CFAP58Q5T655 872 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 HES3Q5TGS1 186 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 CPNE8Q86YQ8 564 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 LZTR1Q8N653 840 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 NIPA2Q8N8Q9 360 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 ZNF548Q8NEK5 533 aaPredicted RBP14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 HCAR2Q8TDS4 363 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 ZNF641Q96N77 438 aaPredicted RBP14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 TUBGCP5Q96RT8 1024 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 PCDH18Q9HCL0 1135 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 IP6K2Q9UHH9 426 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 PNMA8BQ9ULN7 279 aaPredicted RBP14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 NENFQ9UMX5 172 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 PTPRBP23467 1997 aa14.38□□□□□ -0.11
RPRD1B-206ENST00000495457 RIOK3O14730 519 aaKnown RBP14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 SCAMP1O15126 338 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 PEX11BO96011 259 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 C6P13671 934 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 JUPP14923 745 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 EIF4A3P38919 411 aaKnown RBP14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 CSNK1DP48730 415 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 SCNN1BP51168 640 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 DAB2P98082 770 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 ELP6Q0PNE2 266 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 ILKQ13418 452 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 LBRQ14739 615 aaKnown RBP14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 IRF4Q15306 451 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 HS1BP3Q53T59 392 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 BRAT1Q6PJG6 821 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 TMCO3Q6UWJ1 677 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 RBFAQ8N0V3 343 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 PACSIN1Q9BY11 444 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 TCEAL2Q9H3H9 227 aaPredicted RBP14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 ATP13A3Q9H7F0 1226 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 NLGN3Q9NZ94 848 aa14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.37□□□□□ -0.11
RPRD1B-206ENST00000495457 DMXL2Q8TDJ6 3036 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 LY6G6EA0A0G2JKS1 128 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 NEMP2A6NFY4 417 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 K7ESM1 405 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 MYO1FO00160 1098 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 CD48P09326 243 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 ALPPL2P10696 532 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 CDK4P11802 303 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 JUNDP17535 347 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 IL4RP24394 825 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 SERPINA4P29622 427 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 HNRNPH3P31942 346 aaKnown RBP14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 MMP12P39900 470 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 SSR1P43307 286 aaKnown RBP14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 LIG3P49916 1009 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 SUOXP51687 545 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 THOP1P52888 689 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 INSM1Q01101 510 aaPredicted RBP14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 BCL2L1Q07817 233 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 CYP4F3Q08477 520 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 NSUN2Q08J23 767 aaKnown RBP eCLIP14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 TARDBPQ13148 414 aaKnown RBP eCLIP14.36□□□□□ -0.114e-9■■■■■ 30.7
RPRD1B-206ENST00000495457 MMRN1Q13201 1228 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 RFTN1Q14699 578 aaPredicted RBP14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 WSCD2Q2TBF2 565 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 SKOR2Q2VWA4 1001 aaPredicted RBP14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 ATP13A4Q4VNC1 1196 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 TMCO4Q5TGY1 634 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 ERAP2Q6P179 960 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 ZNF564Q8TBZ8 553 aaPredicted RBP14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 LMX1AQ8TE12 382 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 TEKT4Q8WW24 435 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 ECHDC3Q96DC8 303 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 APOLD1Q96LR9 279 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 PSKH2Q96QS6 385 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 C1QTNF7Q9BXJ2 289 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 SEPT3Q9UH03 358 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 ATP8A1Q9Y2Q0 1164 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 U3KQA8 63 aa14.36□□□□□ -0.11
RPRD1B-206ENST00000495457 ARID1BQ8NFD5 2236 aaPredicted RBP14.35□□□□□ -0.11
RPRD1B-206ENST00000495457 H3BM21 787 aa14.35□□□□□ -0.11
RPRD1B-206ENST00000495457 TRAFD1O14545 582 aaPredicted RBP14.35□□□□□ -0.11
RPRD1B-206ENST00000495457 AQP9O43315 295 aa14.35□□□□□ -0.11
RPRD1B-206ENST00000495457 MAFKO60675 156 aa14.35□□□□□ -0.11
RPRD1B-206ENST00000495457 TPM3P06753 285 aa14.35□□□□□ -0.11
RPRD1B-206ENST00000495457 CKMT1AP12532 417 aa14.35□□□□□ -0.11
RPRD1B-206ENST00000495457 HNF1BP35680 557 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms