RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 SPAG1Q07617 926 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 MYO1EQ12965 1108 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 TARDBPQ13148 414 aaKnown RBP eCLIP4.77□□□□□ -1.65
RBM39-240ENST00000495293 MPP3Q13368 585 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 IL10RAQ13651 578 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 KCNB1Q14721 858 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 PSMD5Q16401 504 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 KNOP1Q1ED39 458 aaKnown RBP4.77□□□□□ -1.65
RBM39-240ENST00000495293 C3orf36Q3SXR2 165 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 ARHGAP29Q52LW3 1261 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 COBLL1Q53SF7 1204 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 XKR4Q5GH76 650 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 ATAT1Q5SQI0 421 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 LIN9Q5TKA1 542 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 JADE1Q6IE81 842 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 ANKRD54Q6NXT1 300 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 SARM1Q6SZW1 724 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 TMEM184AQ6ZMB5 413 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 ADGRD2Q7Z7M1 963 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 TMEM173Q86WV6 379 aaPredicted RBP4.77□□□□□ -1.65
RBM39-240ENST00000495293 PALB2Q86YC2 1186 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 GRAMD1CQ8IYS0 662 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 THEM5Q8N1Q8 247 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 TMEM132CQ8N3T6 1108 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 XXYLT1Q8NBI6 393 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 KIF18AQ8NI77 898 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 HPS3Q969F9 1004 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 SMARCE1Q969G3 411 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 C18orf25Q96B23 403 aaPredicted RBP4.77□□□□□ -1.65
RBM39-240ENST00000495293 SAAL1Q96ER3 474 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 HSPBAP1Q96EW2 488 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 ANKRD36BP1Q96IX9 119 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 TEKT5Q96M29 485 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 RIPOR3Q96MK2 946 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 ZNF560Q96MR9 790 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 TIGD1Q96MW7 591 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 NECTIN4Q96NY8 510 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 KLHL5Q96PQ7 755 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 GSDMAQ96QA5 445 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 TSG101Q99816 390 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 STRA6Q9BX79 667 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 MARCH5Q9NX47 278 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 DPP3Q9NY33 737 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 FOXJ2Q9P0K8 574 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 FNIP2Q9P278 1114 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 TESQ9UGI8 421 aaKnown RBP4.77□□□□□ -1.65
RBM39-240ENST00000495293 C2CD2Q9Y426 696 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 DAAM1Q9Y4D1 1078 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 STYXL1Q9Y6J8 313 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 CITO14578 2027 aa4.77□□□□□ -1.65
RBM39-240ENST00000495293 PRRC2BQ5JSZ5 2229 aaKnown RBP4.76□□□□□ -1.65
RBM39-240ENST00000495293 LAMA2P24043 3122 aaKnown RBP4.76□□□□□ -1.65
RBM39-240ENST00000495293 GOLGA8IPA6NC78 632 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 GOLGA8JA6NMD2 632 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 HMGB1P1B2RPK0 211 aaPredicted RBP4.76□□□□□ -1.65
RBM39-240ENST00000495293 TISP43B9A030 160 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 PDXKO00764 312 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 CLIC2O15247 247 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 TEX28O15482 410 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 LINC01565O15544 149 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 MBTPS2O43462 519 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 SERPINC1P01008 464 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 CNPP09543 421 aaKnown RBP4.76□□□□□ -1.65
RBM39-240ENST00000495293 SBK3P0C264 359 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 SPATA31D3P0C874 917 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 ODC1P11926 461 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 SKILP12757 684 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 KRT13P13646 458 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 TRIM21P19474 475 aaKnown RBP4.76□□□□□ -1.65
RBM39-240ENST00000495293 DDCP20711 480 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 ADSSP30520 456 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 LRPAP1P30533 357 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 SLC6A4P31645 630 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 MTHFRP42898 656 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 BRCC3P46736 316 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 TAF6P49848 677 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 CYP2J2P51589 502 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 CLCN4P51793 760 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 AP3M2P53677 418 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 ARPP19P56211 112 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 RBP5P82980 135 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 YWHAHQ04917 246 aaPredicted RBP4.76□□□□□ -1.65
RBM39-240ENST00000495293 STK4Q13043 487 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 TRPC3Q13507 836 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 PNOCQ13519 176 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 MYBPC2Q14324 1141 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 GALEQ14376 348 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 ZNF169Q14929 603 aaPredicted RBP4.76□□□□□ -1.65
RBM39-240ENST00000495293 SYCP1Q15431 976 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 NAB2Q15742 525 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 SNRNP35Q16560 246 aaKnown RBP4.76□□□□□ -1.65
RBM39-240ENST00000495293 GRAMD1BQ3KR37 738 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 CTXN3Q4LDR2 81 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 SPATA1Q5VX52 437 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 SP5Q6BEB4 398 aaPredicted RBP4.76□□□□□ -1.65
RBM39-240ENST00000495293 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
RBM39-240ENST00000495293 ZNF280DQ6N043 979 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 SLC39A4Q6P5W5 647 aa4.76□□□□□ -1.65
RBM39-240ENST00000495293 RBM43Q6ZSC3 357 aaKnown RBP4.76□□□□□ -1.65
RBM39-240ENST00000495293 SPATA31D4Q6ZUB0 917 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms