RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CCT8P50990 548 aa15.48■□□□□ 0.07
SDF4-207ENST00000494748 RAB15P59190 212 aa15.48■□□□□ 0.07
SDF4-207ENST00000494748 ZBTB6Q15916 424 aa15.48■□□□□ 0.07
SDF4-207ENST00000494748 MEX3CQ5U5Q3 659 aaKnown RBP15.48■□□□□ 0.07
SDF4-207ENST00000494748 UNC93AQ86WB7 457 aa15.48■□□□□ 0.07
SDF4-207ENST00000494748 ZUFSPQ96AP4 578 aa15.48■□□□□ 0.07
SDF4-207ENST00000494748 HOXC10Q9NYD6 342 aa15.48■□□□□ 0.07
SDF4-207ENST00000494748 GTSE1Q9NYZ3 720 aa15.48■□□□□ 0.07
SDF4-207ENST00000494748 NCKIPSDQ9NZQ3 722 aa15.48■□□□□ 0.07
SDF4-207ENST00000494748 WDR37Q9Y2I8 494 aa15.48■□□□□ 0.07
SDF4-207ENST00000494748 MIA3Q5JRA6 1907 aa15.48■□□□□ 0.07
SDF4-207ENST00000494748 NRCAMQ92823 1304 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 UBFD1O14562 309 aaKnown RBP15.47■□□□□ 0.07
SDF4-207ENST00000494748 UBDO15205 165 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 UGT1A1P22309 533 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 UGT1A4P22310 534 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 LRPAP1P30533 357 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 OXTRP30559 389 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 UGT1A3P35503 534 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 UGT1A5P35504 534 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 POLR2IP36954 125 aaKnown RBP15.47■□□□□ 0.07
SDF4-207ENST00000494748 ETFBP38117 255 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 ESRRGP62508 458 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 CTBP1Q13363 440 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 MAPRE2Q15555 327 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 GPR107Q5VW38 600 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 CENPSQ8N2Z9 138 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 CHPT1Q8WUD6 406 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 COPS5Q92905 334 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 TBC1D23Q9NUY8 699 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 UBP1Q9NZI7 540 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 DOLKQ9UPQ8 538 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 K7EPI3 171 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 ZBTB11O95625 1053 aaPredicted RBP15.47■□□□□ 0.07
SDF4-207ENST00000494748 ALDOCP09972 364 aaKnown RBP15.47■□□□□ 0.07
SDF4-207ENST00000494748 YWHAQP27348 245 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 PSMD5Q16401 504 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 ZNF618Q5T7W0 954 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 LARP4Q71RC2 724 aaKnown RBP eCLIP15.47■□□□□ 0.072e-17■■■□□ 18.2
SDF4-207ENST00000494748 CMTR2Q8IYT2 770 aaKnown RBP15.47■□□□□ 0.07
SDF4-207ENST00000494748 CRYBG2Q8N1P7 616 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 PPWD1Q96BP3 646 aaKnown RBP15.47■□□□□ 0.07
SDF4-207ENST00000494748 ZNF419Q96HQ0 510 aaPredicted RBP15.47■□□□□ 0.07
SDF4-207ENST00000494748 FEM1CQ96JP0 617 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 ADAMTS10Q9H324 1103 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 MRM3Q9HC36 420 aaKnown RBP15.47■□□□□ 0.07
SDF4-207ENST00000494748 PAIP2BQ9ULR5 123 aaKnown RBP15.47■□□□□ 0.07
SDF4-207ENST00000494748 FIS1Q9Y3D6 152 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 TCAF1Q9Y4C2 921 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 FAM95CA0A1B0GW59 222 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 SRP72O76094 671 aaKnown RBP15.47■□□□□ 0.07
SDF4-207ENST00000494748 ZNF12P17014 697 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 BCAP31P51572 246 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 BMXP51813 675 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 TECRLQ5HYJ1 363 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 FAM117BQ6P1L5 589 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 OR6B3Q8NGW1 331 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 ACDQ96AP0 544 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 MRPL57Q9BQC6 102 aaKnown RBP15.47■□□□□ 0.07
SDF4-207ENST00000494748 NSMCE4AQ9NXX6 385 aa15.47■□□□□ 0.07
SDF4-207ENST00000494748 NYNRINQ9P2P1 1898 aaKnown RBP15.46■□□□□ 0.07
SDF4-207ENST00000494748 SYNJ2BP-COX16A0A087WUM0 186 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 FYNP06241 537 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 GPX3P22352 226 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 TAS2R39P59534 338 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 BNIP3Q12983 259 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 CAMK1DQ8IU85 385 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 C18orf25Q96B23 403 aaPredicted RBP15.46■□□□□ 0.07
SDF4-207ENST00000494748 HDAC11Q96DB2 347 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 PPP1R10Q96QC0 940 aaKnown RBP15.46■□□□□ 0.07
SDF4-207ENST00000494748 EFHD1Q9BUP0 239 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 SLC25A23Q9BV35 468 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 FBRSL1Q9HCM7 1045 aaKnown RBP15.46■□□□□ 0.07
SDF4-207ENST00000494748 COX16Q9P0S2 106 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 HACL1Q9UJ83 578 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 COL4A4P53420 1690 aaPredicted RBP15.46■□□□□ 0.07
SDF4-207ENST00000494748 FXYD1O00168 92 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 CACNG3O60359 315 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 ATP5F1P24539 256 aaPredicted RBP15.46■□□□□ 0.07
SDF4-207ENST00000494748 HMGB2P26583 209 aaKnown RBP15.46■□□□□ 0.07
SDF4-207ENST00000494748 MLLT10P55197 1068 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 LBX2Q6XYB7 198 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 HFE2Q6ZVN8 426 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 USP51Q70EK9 711 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 NIM1KQ8IY84 436 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 RNF168Q8IYW5 571 aaPredicted RBP15.46■□□□□ 0.07
SDF4-207ENST00000494748 ADGRG5Q8IZF4 528 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 SHCBP1Q8NEM2 672 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 SLC2A14Q8TDB8 520 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 HSFY1Q96LI6 401 aa15.46■□□□□ 0.07
SDF4-207ENST00000494748 WDR6Q9NNW5 1121 aaKnown RBP15.46■□□□□ 0.07
SDF4-207ENST00000494748 TTC24A2A3L6 582 aaPredicted RBP15.46■□□□□ 0.06
SDF4-207ENST00000494748 A8MT66 165 aa15.46■□□□□ 0.06
SDF4-207ENST00000494748 HBP1O60381 514 aa15.46■□□□□ 0.06
SDF4-207ENST00000494748 RASAL1O95294 804 aa15.46■□□□□ 0.06
SDF4-207ENST00000494748 OXCT1P55809 520 aa15.46■□□□□ 0.06
SDF4-207ENST00000494748 ADIGQ0VDE8 80 aa15.46■□□□□ 0.06
SDF4-207ENST00000494748 GRSF1Q12849 480 aaKnown RBP eCLIP15.46■□□□□ 0.06
SDF4-207ENST00000494748 CYBRD1Q53TN4 286 aa15.46■□□□□ 0.06
SDF4-207ENST00000494748 PRAMEF18Q5VWM3 479 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms