RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 KLHL40Q2TBA0 621 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 TBC1D25Q3MII6 688 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 ANO6Q4KMQ2 910 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 FAXCQ5TGI0 409 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 KDM7AQ6ZMT4 941 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 VPS36Q86VN1 386 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 NAT6Q93015 286 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 VOPP1Q96AW1 172 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 SYT11Q9BT88 431 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 HAUS4Q9H6D7 363 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 ZWILCHQ9H900 591 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 LHX3Q9UBR4 397 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 GGT7Q9UJ14 662 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 DOLKQ9UPQ8 538 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 ITM2BQ9Y287 266 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 BZW2Q9Y6E2 419 aaKnown RBP12.58□□□□□ -0.4
COL6A1-205ENST00000492851 ITPR1Q14643 2758 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 TEX33O43247 280 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 SPINT1O43278 529 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 LZTS3O60299 673 aaPredicted RBP12.57□□□□□ -0.4
COL6A1-205ENST00000492851 BRINP1O60477 761 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 TCEA3O75764 348 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 NEBLO76041 1014 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 DXOO77932 396 aaKnown RBP12.57□□□□□ -0.4
COL6A1-205ENST00000492851 CTSEP14091 401 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 ZNF165P49910 485 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 PAPOLAP51003 745 aaKnown RBP12.57□□□□□ -0.4
COL6A1-205ENST00000492851 ADKP55263 362 aaKnown RBP12.57□□□□□ -0.4
COL6A1-205ENST00000492851 CLDN6P56747 220 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 ERVPABLB-1P60509 514 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 TPM4P67936 248 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 OGDHQ02218 1023 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 IL10RBQ08334 325 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 KLHL30Q0D2K2 578 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 ELOCQ15369 112 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 BOLA3Q53S33 107 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 PRRT3Q5FWE3 981 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 RFX8Q6ZV50 586 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 SRLQ86TD4 932 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 PHACTR4Q8IZ21 702 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 PAF1Q8N7H5 531 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 TP53I13Q8NBR0 393 aaPredicted RBP12.57□□□□□ -0.4
COL6A1-205ENST00000492851 ZNF248Q8NDW4 579 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 OR6C4Q8NGE1 309 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 ZNF599Q96NL3 588 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 WRAP53Q9BUR4 548 aaKnown RBP12.57□□□□□ -0.4
COL6A1-205ENST00000492851 CINPQ9BW66 212 aaPredicted RBP12.57□□□□□ -0.4
COL6A1-205ENST00000492851 BOCQ9BWV1 1114 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 SLC39A8Q9C0K1 460 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 KLC2Q9H0B6 622 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 POLR1BQ9H9Y6 1135 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 SP110Q9HB58 689 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 PDFQ9HBH1 243 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 KCTD5Q9NXV2 234 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 CNOT8Q9UFF9 292 aaKnown RBP12.57□□□□□ -0.4
COL6A1-205ENST00000492851 PCSK1NQ9UHG2 260 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 KLF15Q9UIH9 416 aa12.57□□□□□ -0.4
COL6A1-205ENST00000492851 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.56□□□□□ -0.4
COL6A1-205ENST00000492851 CPED1A4D0V7 1026 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 TMX2-CTNND1H3BSU7 103 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 J3KR12 359 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 USP12O75317 370 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 CSO75390 466 aaKnown RBP12.56□□□□□ -0.4
COL6A1-205ENST00000492851 RASGRP1O95267 797 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 SERPINC1P01008 464 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 ERCC2P18074 760 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 KELP23276 732 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 MIPP30301 263 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 PCK1P35558 622 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 IGFALSP35858 605 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 HSPA9P38646 679 aaKnown RBP12.56□□□□□ -0.4
COL6A1-205ENST00000492851 LIG3P49916 1009 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 BCL2L1Q07817 233 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 CDKN3Q16667 212 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 DEFB133Q30KQ1 61 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 FIGNQ5HY92 759 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 C6orf132Q5T0Z8 1188 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 AFMIDQ63HM1 303 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 IGF2-ASQ6U949 168 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 EFL1Q7Z2Z2 1120 aaKnown RBP12.56□□□□□ -0.4
COL6A1-205ENST00000492851 GKN2Q86XP6 184 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 BBS5Q8N3I7 341 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 LSM14AQ8ND56 463 aaKnown RBP12.56□□□□□ -0.4
COL6A1-205ENST00000492851 IQCDQ96DY2 449 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 CELF6Q96J87 481 aaKnown RBP12.56□□□□□ -0.4
COL6A1-205ENST00000492851 EXOC2Q96KP1 924 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 UBL7Q96S82 380 aaPredicted RBP12.56□□□□□ -0.4
COL6A1-205ENST00000492851 PCDH12Q9NPG4 1184 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 MBNL1Q9NR56 388 aaKnown RBP12.56□□□□□ -0.4
COL6A1-205ENST00000492851 TAS2R14Q9NYV8 317 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 SEPT3Q9UH03 358 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 ATP8A1Q9Y2Q0 1164 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 LAMA5O15230 3695 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 ADAMTS20P59510 1910 aa12.56□□□□□ -0.4
COL6A1-205ENST00000492851 LY6G6EA0A0G2JKS1 128 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 A0A1B0GTH6 734 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 H3BRJ5 948 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 TK2O00142 265 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 DFFAO00273 331 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 PDE2AO00408 941 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms