RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 RCN1Q15293 331 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 CHI3L2Q15782 390 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 ACSBG2Q5FVE4 666 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 RAB3IL1Q8TBN0 382 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 ZYG11BQ9C0D3 744 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 UGT1A7Q9HAW7 530 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 UGT1A10Q9HAW8 530 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 UGT1A8Q9HAW9 530 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 ARMCX1Q9P291 453 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 PPARGC1AQ9UBK2 798 aaKnown RBP23.02■■□□□ 1.28
USF3-203ENST00000491165 MAD1L1Q9Y6D9 718 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 A0A0C4DFX4 3053 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 VHLP40337 213 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 NUDCD3Q8IVD9 361 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 OR52K2Q8NGK3 314 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 BPIFB1Q8TDL5 484 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 EBNA1BP2Q99848 306 aaKnown RBP23.02■■□□□ 1.28
USF3-203ENST00000491165 WWP1Q9H0M0 922 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 ZFP14Q9HCL3 533 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 CHD5Q8TDI0 1954 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 FAM159BA6NKW6 160 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 NVLO15381 856 aaKnown RBP23.01■■□□□ 1.27
USF3-203ENST00000491165 GCATO75600 419 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 TPSB2P20231 275 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 SESN3P58005 492 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 OCRLQ01968 901 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 TPSAB1Q15661 275 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 TEX44Q53QW1 395 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 TMEM25Q86YD3 366 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 ADGRG2Q8IZP9 1017 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 TDRD5Q8NAT2 981 aaKnown RBP23.01■■□□□ 1.27
USF3-203ENST00000491165 SIGLEC10Q96LC7 697 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 PCMTD2Q9NV79 361 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 ZFATQ9P243 1243 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 CLEC4EQ9ULY5 219 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 COL4A3Q01955 1670 aa23.01■■□□□ 1.27
USF3-203ENST00000491165 OTOL1A6NHN0 477 aaPredicted RBP23■■□□□ 1.27
USF3-203ENST00000491165 C2CD4DB7Z1M9 353 aa23■■□□□ 1.27
USF3-203ENST00000491165 SKAP2O75563 359 aaPredicted RBP23■■□□□ 1.27
USF3-203ENST00000491165 METTL18O95568 372 aa23■■□□□ 1.27
USF3-203ENST00000491165 SERPINB9P50453 376 aa23■■□□□ 1.27
USF3-203ENST00000491165 CDK18Q07002 472 aa23■■□□□ 1.27
USF3-203ENST00000491165 MTA1Q13330 715 aa23■■□□□ 1.27
USF3-203ENST00000491165 GRM2Q14416 872 aa23■■□□□ 1.27
USF3-203ENST00000491165 ANO7Q6IWH7 933 aa23■■□□□ 1.27
USF3-203ENST00000491165 ZNF534Q76KX8 674 aa23■■□□□ 1.27
USF3-203ENST00000491165 CPXM2Q8N436 756 aa23■■□□□ 1.27
USF3-203ENST00000491165 WFDC5Q8TCV5 224 aa23■■□□□ 1.27
USF3-203ENST00000491165 STMN2Q93045 179 aa23■■□□□ 1.27
USF3-203ENST00000491165 DTLQ9NZJ0 730 aa23■■□□□ 1.27
USF3-203ENST00000491165 ZNF510Q9Y2H8 683 aa23■■□□□ 1.27
USF3-203ENST00000491165 SHROOM3Q8TF72 1996 aa23■■□□□ 1.27
USF3-203ENST00000491165 CAPN14A8MX76 684 aa23■■□□□ 1.27
USF3-203ENST00000491165 KRT36O76013 467 aa23■■□□□ 1.27
USF3-203ENST00000491165 NEBLO76041 1014 aa23■■□□□ 1.27
USF3-203ENST00000491165 PSMG1O95456 288 aa23■■□□□ 1.27
USF3-203ENST00000491165 CRHR1P34998 444 aa23■■□□□ 1.27
USF3-203ENST00000491165 TRMT10BQ6PF06 316 aaKnown RBP23■■□□□ 1.27
USF3-203ENST00000491165 CRLF3Q8IUI8 442 aa23■■□□□ 1.27
USF3-203ENST00000491165 NDUFAF2Q8N183 169 aa23■■□□□ 1.27
USF3-203ENST00000491165 RTL3Q8N8U3 475 aaKnown RBP23■■□□□ 1.27
USF3-203ENST00000491165 CELF6Q96J87 481 aaKnown RBP23■■□□□ 1.27
USF3-203ENST00000491165 NOL6Q9H6R4 1146 aaKnown RBP23■■□□□ 1.27
USF3-203ENST00000491165 XAB2Q9HCS7 855 aaKnown RBP23■■□□□ 1.27
USF3-203ENST00000491165 NMRK1Q9NWW6 199 aa23■■□□□ 1.27
USF3-203ENST00000491165 MYO10Q9HD67 2058 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 A6NHS1 94 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 ZFXP17010 805 aaPredicted RBP22.99■■□□□ 1.27
USF3-203ENST00000491165 PGM1P36871 562 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 ZNF135P52742 658 aaPredicted RBP22.99■■□□□ 1.27
USF3-203ENST00000491165 TNK2Q07912 1038 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 MROH9Q5TGP6 573 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 OSCP1Q8WVF1 389 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 TMEM248Q9NWD8 314 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 EPS15L1Q9UBC2 864 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 BIRC5O15392 142 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 TBL1XO60907 577 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 HOXD9P28356 352 aaPredicted RBP22.99■■□□□ 1.27
USF3-203ENST00000491165 PAFAH1B3Q15102 231 aaKnown RBP22.99■■□□□ 1.27
USF3-203ENST00000491165 EML3Q32P44 896 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 HSF5Q4G112 596 aaPredicted RBP22.99■■□□□ 1.27
USF3-203ENST00000491165 CES4AQ5XG92 561 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 MPP5Q8N3R9 675 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 PDCD7Q8N8D1 485 aaKnown RBP22.99■■□□□ 1.27
USF3-203ENST00000491165 MAFAQ8NHW3 353 aaPredicted RBP22.99■■□□□ 1.27
USF3-203ENST00000491165 DEPDC1BQ8WUY9 529 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 WDR60Q8WVS4 1066 aa22.99■■□□□ 1.27
USF3-203ENST00000491165 TMA16Q96EY4 203 aaKnown RBP22.99■■□□□ 1.27
USF3-203ENST00000491165 DUS2Q9NX74 493 aaKnown RBP22.99■■□□□ 1.27
USF3-203ENST00000491165 FGF10O15520 208 aaPredicted RBP22.98■■□□□ 1.27
USF3-203ENST00000491165 BPGMP07738 259 aa22.98■■□□□ 1.27
USF3-203ENST00000491165 ARSAP15289 507 aa22.98■■□□□ 1.27
USF3-203ENST00000491165 RHOQP17081 205 aa22.98■■□□□ 1.27
USF3-203ENST00000491165 HTR7P34969 479 aa22.98■■□□□ 1.27
USF3-203ENST00000491165 NR2C2P49116 596 aa22.98■■□□□ 1.27
USF3-203ENST00000491165 MRPS35P82673 323 aaKnown RBP22.98■■□□□ 1.27
USF3-203ENST00000491165 SLC34A1Q06495 639 aa22.98■■□□□ 1.27
USF3-203ENST00000491165 FCHO2Q0JRZ9 810 aa22.98■■□□□ 1.27
USF3-203ENST00000491165 SMAD2Q15796 467 aaKnown RBP22.98■■□□□ 1.27
USF3-203ENST00000491165 LEXMQ3ZCV2 418 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms