RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 PSMA2P25787 234 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 IGFALSP35858 605 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 BLKP51451 505 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 PCBP4P57723 403 aaKnown RBP11.37□□□□□ -0.59
DUBR-204ENST00000490441 GABREP78334 506 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 PPARDQ03181 441 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 CCDC173Q0VFZ6 552 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 EIF2B5Q13144 721 aaKnown RBP11.37□□□□□ -0.59
DUBR-204ENST00000490441 KLHL40Q2TBA0 621 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 PRRT3Q5FWE3 981 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 TPRG1LQ5T0D9 272 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 CCDC183Q5T5S1 534 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 FAXCQ5TGI0 409 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 CDCP2Q5VXM1 449 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 ERAP2Q6P179 960 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 MACC1Q6ZN28 852 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 EFL1Q7Z2Z2 1120 aaKnown RBP11.37□□□□□ -0.59
DUBR-204ENST00000490441 RBFAQ8N0V3 343 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 TPCN2Q8NHX9 752 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 CENPTQ96BT3 561 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 EXOC2Q96KP1 924 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 ZNF578Q96N58 590 aaPredicted RBP11.37□□□□□ -0.59
DUBR-204ENST00000490441 FCRL3Q96P31 734 aaPredicted RBP11.37□□□□□ -0.59
DUBR-204ENST00000490441 LGMNQ99538 433 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 CPEB1Q9BZB8 566 aaKnown RBP11.37□□□□□ -0.59
DUBR-204ENST00000490441 KLC2Q9H0B6 622 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 PARVAQ9NVD7 372 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 KLF15Q9UIH9 416 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 DOLKQ9UPQ8 538 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 U3KQA8 63 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 RP1P56715 2156 aa11.37□□□□□ -0.59
DUBR-204ENST00000490441 ARHGAP42A6NI28 874 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 TMCO5BA8MYB1 307 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 EIF3CLB5ME19 914 aaKnown RBP11.36□□□□□ -0.59
DUBR-204ENST00000490441 EEF2KO00418 725 aaKnown RBP11.36□□□□□ -0.59
DUBR-204ENST00000490441 MUSKO15146 869 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 PIGNO95427 931 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 MBD3O95983 291 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 TIMP2P16035 220 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 HTR1BP28222 390 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 EIF4A3P38919 411 aaKnown RBP11.36□□□□□ -0.59
DUBR-204ENST00000490441 NDST2P52849 883 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 ADKP55263 362 aaKnown RBP11.36□□□□□ -0.59
DUBR-204ENST00000490441 C1orf61Q13536 156 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 LRRC14Q15048 493 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 IRF4Q15306 451 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 ESRP1Q6NXG1 681 aaKnown RBP11.36□□□□□ -0.59
DUBR-204ENST00000490441 GUSBP11Q6P575 273 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 BRAT1Q6PJG6 821 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 AOPEPQ8N6M6 819 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 TTC13Q8NBP0 860 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 ZNF248Q8NDW4 579 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 ATL2Q8NHH9 583 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 HCAR2Q8TDS4 363 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 SCG3Q8WXD2 468 aaKnown RBP11.36□□□□□ -0.59
DUBR-204ENST00000490441 NAT6Q93015 286 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 CELF6Q96J87 481 aaKnown RBP11.36□□□□□ -0.59
DUBR-204ENST00000490441 VCPIP1Q96JH7 1222 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 TBATAQ96M53 351 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 EIF3CQ99613 913 aaKnown RBP11.36□□□□□ -0.59
DUBR-204ENST00000490441 LRRC61Q9BV99 259 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 SUV39H2Q9H5I1 410 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 DHX35Q9H5Z1 703 aaKnown RBP11.36□□□□□ -0.59
DUBR-204ENST00000490441 POLR1BQ9H9Y6 1135 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 GPATCH2LQ9NWQ4 482 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 LHX3Q9UBR4 397 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 MYO6Q9UM54 1294 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 AP4E1Q9UPM8 1137 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 SHROOM3Q8TF72 1996 aa11.36□□□□□ -0.59
DUBR-204ENST00000490441 EME2A4GXA9 379 aaPredicted RBP11.35□□□□□ -0.59
DUBR-204ENST00000490441 TMEM110-MUSTN1A8MSY1 372 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 LMO7DNF2Z398 122 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 INSIG1O15503 277 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 LZTS3O60299 673 aaPredicted RBP11.35□□□□□ -0.59
DUBR-204ENST00000490441 PRAMEF11O60813 436 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 GCATO75600 419 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 PALMO75781 387 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 RNF8O76064 485 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 ATP1A3P13637 1013 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 C6P13671 934 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 CTSEP14091 401 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 ITIH2P19823 946 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 TGM2P21980 687 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 SERPINA4P29622 427 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 LSSP48449 732 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 PEX5P50542 639 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 OGDHQ02218 1023 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 TYRO3Q06418 890 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 MAMLD1Q13495 774 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 NCAPHQ15003 741 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 ELOCQ15369 112 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 CYTH1Q15438 398 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 ASIC2Q16515 512 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 UGP2Q16851 508 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 ISXQ2M1V0 245 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 TMEM52BQ4KMG9 183 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 FILIP1LQ4L180 1135 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 BROXQ5VW32 411 aa11.35□□□□□ -0.59
DUBR-204ENST00000490441 RBM44Q6ZP01 1051 aaKnown RBP11.35□□□□□ -0.59
DUBR-204ENST00000490441 SPACA3Q8IXA5 215 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms