RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	NOVA1	P51513	510 aa	Known RBP	18.39	■□□□□ 0.53
SRM-206	ENST00000490101	GEMIN4	P57678	1058 aa	Known RBP	18.39	■□□□□ 0.53
SRM-206	ENST00000490101	IRX4	P78413	519 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	BASP1	P80723	227 aa	Known RBP	18.39	■□□□□ 0.53
SRM-206	ENST00000490101	ARF5	P84085	180 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	CDK16	Q00536	496 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	SLC20A2	Q08357	652 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	MAP7D1	Q3KQU3	841 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	MAP9	Q49MG5	647 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	PITRM1	Q5JRX3	1037 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	EGFLAM	Q63HQ2	1017 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	RETSAT	Q6NUM9	610 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	TAB3	Q8N5C8	712 aa	Predicted RBP	18.39	■□□□□ 0.53
SRM-206	ENST00000490101	AEN	Q8WTP8	325 aa	Known RBP	18.39	■□□□□ 0.53
SRM-206	ENST00000490101	PPP1R2P1	Q96PQ5	205 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	FCRL5	Q96RD9	977 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	EIF2B3	Q9NR50	452 aa	Known RBP	18.39	■□□□□ 0.53
SRM-206	ENST00000490101	ARGLU1	Q9NWB6	273 aa	Predicted RBP	18.39	■□□□□ 0.53
SRM-206	ENST00000490101	SEPT3	Q9UH03	358 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	RSPH14	Q9UHP6	348 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	HCN2	Q9UL51	889 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	SLC27A6	Q9Y2P4	619 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	GON4L	Q3T8J9	2241 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	CD160	O95971	181 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	HLA-DQB2	P05538	268 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	TPSB2	P20231	275 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	PML	P29590	882 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	NTSR1	P30989	418 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	TPSAB1	Q15661	275 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	UAP1L1	Q3KQV9	507 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	TRIM61	Q5EBN2	209 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	FAXC	Q5TGI0	409 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	ANKRD22	Q5VYY1	191 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	EMB	Q6PCB8	327 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	LEKR1	Q6ZMV7	388 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	GSPT2	Q8IYD1	628 aa	Known RBP	18.38	■□□□□ 0.53
SRM-206	ENST00000490101	BBS5	Q8N3I7	341 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	DEFB119	Q8N690	84 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	WFIKKN2	Q8TEU8	576 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	PRCC	Q92733	491 aa	Predicted RBP	18.38	■□□□□ 0.53
SRM-206	ENST00000490101	PSKH2	Q96QS6	385 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	ACOX2	Q99424	681 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	FMO2	Q99518	471 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	FRMD8	Q9BZ67	464 aa	Predicted RBP	18.38	■□□□□ 0.53
SRM-206	ENST00000490101	TSPYL1	Q9H0U9	437 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	SLC25A51	Q9H1U9	297 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	NT5M	Q9NPB1	228 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	HAUS2	Q9NVX0	235 aa		18.38	■□□□□ 0.53
SRM-206	ENST00000490101	MTRF1L	Q9UGC7	380 aa	Known RBP	18.38	■□□□□ 0.53
SRM-206	ENST00000490101	TCRBV7S3A2	A0A539	114 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	ERI2	A8K979	691 aa	Known RBP	18.37	■□□□□ 0.53
SRM-206	ENST00000490101	PSMD3	O43242	534 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	GABRG2	P18507	467 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	HSPA9	P38646	679 aa	Known RBP	18.37	■□□□□ 0.53
SRM-206	ENST00000490101	DGKG	P49619	791 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	SULT2A1	Q06520	285 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	CBLB	Q13191	982 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	PRPSAP1	Q14558	356 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	ZNF235	Q14590	738 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	CYTH1	Q15438	398 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	FUT11	Q495W5	492 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	LYSMD4	Q5XG99	296 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	ALG1L	Q6GMV1	187 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	SDE2	Q6IQ49	451 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	METTL3	Q86U44	580 aa	Known RBP	18.37	■□□□□ 0.53
SRM-206	ENST00000490101	CHPF	Q8IZ52	775 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	AHI1	Q8N157	1196 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	PGBD5	Q8N414	524 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	ZCCHC9	Q8N567	271 aa	Known RBP	18.37	■□□□□ 0.53
SRM-206	ENST00000490101	MCU	Q8NE86	351 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	KCNV2	Q8TDN2	545 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	TTC17	Q96AE7	1141 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	GORASP1	Q9BQQ3	440 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	TMEM74B	Q9NUR3	256 aa		18.37	■□□□□ 0.53
SRM-206	ENST00000490101	PRRT4	C9JH25	899 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101		E7EVH7	732 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	CDX4	O14627	284 aa	Predicted RBP	18.36	■□□□□ 0.53
SRM-206	ENST00000490101	ANXA9	O76027	345 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	TMEM63A	O94886	807 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	APRT	P07741	180 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	FAM153B	P0C7A2	387 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	ITPKA	P23677	461 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	MAPK8	P45983	427 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	NUMB	P49757	651 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	RPL6	Q02878	288 aa	Known RBP	18.36	■□□□□ 0.53
SRM-206	ENST00000490101	FAM153C	Q494X1	144 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	FBXO38	Q6PIJ6	1188 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	ADIPOR2	Q86V24	386 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	SYT12	Q8IV01	421 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	CHD6	Q8TD26	2715 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	CAVIN3	Q969G5	261 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	IMP4	Q96G21	291 aa	Known RBP	18.36	■□□□□ 0.53
SRM-206	ENST00000490101	MGME1	Q9BQP7	344 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	NUSAP1	Q9BXS6	441 aa	Known RBP	18.36	■□□□□ 0.53
SRM-206	ENST00000490101	POLR1E	Q9GZS1	481 aa	Known RBP	18.36	■□□□□ 0.53
SRM-206	ENST00000490101	FAM153A	Q9UHL3	310 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	ACTL7A	Q9Y615	435 aa		18.36	■□□□□ 0.53
SRM-206	ENST00000490101	PLXND1	Q9Y4D7	1925 aa		18.35	■□□□□ 0.53
SRM-206	ENST00000490101	TNRC6B	Q9UPQ9	1833 aa	Known RBP	18.35	■□□□□ 0.53
SRM-206	ENST00000490101		A0A1W2PQF6	199 aa		18.35	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms