RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CRELD1Q96HD1 420 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 SENP8Q96LD8 212 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 MRPL17Q9NRX2 175 aaKnown RBP8.91□□□□□ -0.98
LSAMP-205ENST00000490035 IKZF3Q9UKT9 509 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 ZNF214Q9UL59 606 aaPredicted RBP8.91□□□□□ -0.98
LSAMP-205ENST00000490035 ZNF780BQ9Y6R6 833 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 MICAL3Q7RTP6 2002 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 CASTOR2A6NHX0 329 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 NR2F6P10588 404 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 DPEP1P16444 411 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 AP3S2P59780 193 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 SMYD1Q8NB12 490 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 C3orf14Q9HBI5 128 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 TEX46H3BTG2 121 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 CCDC166P0CW27 439 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 CDH5P33151 784 aaPredicted RBP8.91□□□□□ -0.98
LSAMP-205ENST00000490035 IRF8Q02556 426 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 VSTM1Q6UX27 236 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 LGI2Q8N0V4 545 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 CXorf40AQ8TE69 158 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 SHCBP1LQ9BZQ2 653 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 HMX1Q9NP08 348 aaPredicted RBP8.91□□□□□ -0.98
LSAMP-205ENST00000490035 SSU72Q9NP77 194 aaKnown RBP8.91□□□□□ -0.98
LSAMP-205ENST00000490035 DMTF1Q9Y222 760 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 ALOX12P18054 663 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 AMPD1P23109 780 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 FAAP100Q0VG06 881 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 CES5AQ6NT32 575 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 SLC25A24Q6NUK1 477 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 DHDDSQ86SQ9 333 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 WDR48Q8TAF3 677 aa8.91□□□□□ -0.98
LSAMP-205ENST00000490035 BCL9O00512 1426 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 HOXA10P31260 410 aaPredicted RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 CDH24Q86UP0 819 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 TMC8Q8IU68 726 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 RNASE11Q8TAA1 199 aaKnown RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 HM13Q8TCT9 377 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 ZKSCAN4Q969J2 545 aaPredicted RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 SNX7Q9UNH6 387 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 E5RJQ4 531 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 TNFAIP8L3Q5GJ75 292 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 IRGQQ8WZA9 623 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 CLP1Q92989 425 aaKnown RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 GMPPBQ9Y5P6 360 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 OR6C75A6NL08 312 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 RECQL4O94761 1208 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 ADORA2AP29274 412 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 PBLDP30039 288 aaPredicted RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 RPA3P35244 121 aaPredicted RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 PTP4A2Q12974 167 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 PFKFB4Q16877 469 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 SLC25A52Q3SY17 297 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 FNDC3BQ53EP0 1204 aaKnown RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 NATD1Q8N6N6 113 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 SCAIQ8N9R8 606 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 TEX47Q8TBZ9 253 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 IFT80Q9P2H3 777 aaPredicted RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 RAB26Q9ULW5 256 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 SH3GLB1Q9Y371 365 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 AK5Q9Y6K8 562 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 RIMBP3CA6NJZ7 1639 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 RIMBP3BA6NNM3 1639 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 RIMBP3Q9UFD9 1639 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 DHRS12A0PJE2 317 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 C5orf60A6NFR6 353 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 AP3D1O14617 1153 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 VEGFAP15692 232 aaPredicted RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 SLC26A3P40879 764 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 GRIA4P48058 902 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 ROR2Q01974 943 aaKnown RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 COX4I2Q96KJ9 171 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 OMDQ99983 421 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 RBM4BQ9BQ04 359 aaKnown RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 RBM4Q9BWF3 364 aaKnown RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 SUCOQ9UBS9 1254 aaKnown RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 RIC1Q4ADV7 1423 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 EIF4E1BA6NMX2 242 aaKnown RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 FAM86B1E9PN63 330 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 FAM86B2P0C5J1 330 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 COX4I1P13073 169 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 BTG3Q14201 252 aaPredicted RBP8.9□□□□□ -0.98
LSAMP-205ENST00000490035 TSHZ1Q6ZSZ6 1077 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 CHSY3Q70JA7 882 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 COMMD2Q86X83 199 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 PPP1R14BQ96C90 147 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 RHOJQ9H4E5 214 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 ASB8Q9H765 288 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 STOML2Q9UJZ1 356 aa8.9□□□□□ -0.98
LSAMP-205ENST00000490035 ZNF286BP0CG31 522 aa8.9□□□□□ -0.99
LSAMP-205ENST00000490035 HGFP14210 728 aa8.9□□□□□ -0.99
LSAMP-205ENST00000490035 CRHR1P34998 444 aa8.9□□□□□ -0.99
LSAMP-205ENST00000490035 ATP12AP54707 1039 aa8.9□□□□□ -0.99
LSAMP-205ENST00000490035 FAM43BQ6ZT52 329 aaPredicted RBP8.9□□□□□ -0.99
LSAMP-205ENST00000490035 OAFQ86UD1 273 aa8.9□□□□□ -0.99
LSAMP-205ENST00000490035 VSIG10LQ86VR7 867 aa8.9□□□□□ -0.99
LSAMP-205ENST00000490035 FBXW8Q8N3Y1 598 aa8.9□□□□□ -0.99
LSAMP-205ENST00000490035 SNIP1Q8TAD8 396 aaKnown RBP8.9□□□□□ -0.99
LSAMP-205ENST00000490035 DNAJB3Q8WWF6 145 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms