RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	FZD3	Q9NPG1	666 aa		11.19	□□□□□ -0.62
GGA1-222	ENST00000489772	HAUS2	Q9NVX0	235 aa		11.19	□□□□□ -0.62
GGA1-222	ENST00000489772	DDX56	Q9NY93	547 aa	Known RBP	11.19	□□□□□ -0.62
GGA1-222	ENST00000489772	IMPACT	Q9P2X3	320 aa		11.19	□□□□□ -0.62
GGA1-222	ENST00000489772	GGT7	Q9UJ14	662 aa		11.19	□□□□□ -0.62
GGA1-222	ENST00000489772	CA5B	Q9Y2D0	317 aa		11.19	□□□□□ -0.62
GGA1-222	ENST00000489772	HS3ST3A1	Q9Y663	406 aa		11.19	□□□□□ -0.62
GGA1-222	ENST00000489772	CNOT1	A5YKK6	2376 aa	Known RBP	11.19	□□□□□ -0.62
GGA1-222	ENST00000489772		A6NNZ2	444 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	GOLGA6L6	A8MZA4	724 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	ZNF487	B1APH4	448 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	FPGT	O14772	594 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	SPINT1	O43278	529 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	MMP20	O60882	483 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	TM7SF2	O76062	418 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	KRT1	P04264	644 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	ZFX	P17010	805 aa	Predicted RBP	11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	GRK6	P43250	576 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	CLDN2	P57739	230 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	SIM1	P81133	766 aa	Predicted RBP	11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	IL9R	Q01113	521 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	GBE1	Q04446	702 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	FGL2	Q14314	439 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	TRIP6	Q15654	476 aa	Known RBP	11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	IFI16	Q16666	785 aa	Known RBP	11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	INAVA	Q3KP66	663 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	RALGPS1	Q5JS13	557 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	DBX2	Q6ZNG2	339 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	SPATS2	Q86XZ4	545 aa	Known RBP	11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	DCP2	Q8IU60	420 aa	Known RBP	11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	RHBDD1	Q8TEB9	315 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	CAMK1G	Q96NX5	476 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	NUDCD1	Q96RS6	583 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	MGME1	Q9BQP7	344 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	WRAP53	Q9BUR4	548 aa	Known RBP	11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	PCDH12	Q9NPG4	1184 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	PCOLCE2	Q9UKZ9	415 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	HYOU1	Q9Y4L1	999 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	ALG6	Q9Y672	507 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	CACNA1E	Q15878	2313 aa		11.18	□□□□□ -0.62
GGA1-222	ENST00000489772	SPAAR	A0A1B0GVQ0	90 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772		A0A1W2PQ67	120 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	TTC24	A2A3L6	582 aa	Predicted RBP	11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	C3orf70	A6NLC5	250 aa	Predicted RBP	11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	RIOK3	O14730	519 aa	Known RBP	11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	APOL1	O14791	398 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	MATN3	O15232	486 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	PSTPIP1	O43586	416 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	CBFA2T3	O75081	653 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	SOCS5	O75159	536 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	NEBL	O76041	1014 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	MAP3K6	O95382	1288 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	ITGAV	P06756	1048 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	ITIH2	P19823	946 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	CCNC	P24863	283 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	NFKBIA	P25963	317 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	RABIF	P47224	123 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	RXRG	P48443	463 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	NAP1L1	P55209	391 aa	Known RBP	11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	ITK	Q08881	620 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	TMEM52B	Q4KMG9	183 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	C11orf63	Q6NUN7	778 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	KYAT3	Q6YP21	454 aa	Known RBP	11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	GCNT7	Q6ZNI0	430 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772		Q6ZSR6	202 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	ABI3BP	Q7Z7G0	1075 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	PGBD5	Q8N414	524 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	TEX26	Q8N6G2	289 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	SPC24	Q8NBT2	197 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	CCNY	Q8ND76	341 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	DENND6B	Q8NEG7	585 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	OR13H1	Q8NG92	308 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	FATE1	Q969F0	183 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	RNF25	Q96BH1	459 aa	Predicted RBP	11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	ECHDC3	Q96DC8	303 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	TSGA13	Q96PP4	275 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	CDC6	Q99741	560 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	POLR1E	Q9GZS1	481 aa	Known RBP	11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	NOD2	Q9HC29	1040 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	NT5M	Q9NPB1	228 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	DTL	Q9NZJ0	730 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	TFR2	Q9UP52	801 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	ATP8A1	Q9Y2Q0	1164 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	CEP192	Q8TEP8	1941 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	CHD5	Q8TDI0	1954 aa		11.17	□□□□□ -0.62
GGA1-222	ENST00000489772	TRAFD1	O14545	582 aa	Predicted RBP	11.16	□□□□□ -0.62
GGA1-222	ENST00000489772	RAD51B	O15315	384 aa		11.16	□□□□□ -0.62
GGA1-222	ENST00000489772	CCNB1	P14635	433 aa		11.16	□□□□□ -0.62
GGA1-222	ENST00000489772	CR2	P20023	1033 aa		11.16	□□□□□ -0.62
GGA1-222	ENST00000489772	CES1	P23141	567 aa		11.16	□□□□□ -0.62
GGA1-222	ENST00000489772	EPHA8	P29322	1005 aa	Predicted RBP	11.16	□□□□□ -0.62
GGA1-222	ENST00000489772	MMP12	P39900	470 aa		11.16	□□□□□ -0.62
GGA1-222	ENST00000489772	LIG3	P49916	1009 aa		11.16	□□□□□ -0.62
GGA1-222	ENST00000489772	MAX	P61244	160 aa		11.16	□□□□□ -0.62
GGA1-222	ENST00000489772	FAM193A	P78312	1265 aa		11.16	□□□□□ -0.62
GGA1-222	ENST00000489772	SHB	Q15464	509 aa		11.16	□□□□□ -0.62
GGA1-222	ENST00000489772	SLC9A4	Q6AI14	798 aa		11.16	□□□□□ -0.62
GGA1-222	ENST00000489772	RAD9B	Q6WBX8	426 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms