RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 ATP5BP06576 529 aaKnown RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 PSMA3P25788 255 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 OAS2P29728 719 aaKnown RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 GDI1P31150 447 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 GRIA4P48058 902 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 ACVR1Q04771 509 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 MESP2Q0VG99 397 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 EFTUD2Q15029 972 aaKnown RBP eCLIP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 ITPRIPL2Q3MIP1 535 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 KBTBD12Q3ZCT8 623 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 ANKRD20A4Q4UJ75 823 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 CARD16Q5EG05 197 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 ATXN7L2Q5T6C5 722 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 KIAA0930Q6ICG6 404 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 CASC4Q6P4E1 433 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 TRMT10BQ6PF06 316 aaKnown RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 ADGRD1Q6QNK2 874 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 MARK2Q7KZI7 788 aaKnown RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 NLRP9Q7RTR0 991 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 RNF135Q8IUD6 432 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 CNPY4Q8N129 248 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 GOLGA6L1Q8N7Z2 621 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 SLC44A1Q8WWI5 657 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 ZNF669Q96BR6 464 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 ECHDC3Q96DC8 303 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 RPL10LQ96L21 214 aaKnown RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 FAM161BQ96MY7 647 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 FCRL3Q96P31 734 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 PAFAH2Q99487 392 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 RPP25Q9BUL9 199 aaKnown RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 CPEB1Q9BZB8 566 aaKnown RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 TM6SF2Q9BZW4 377 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 CHRAC1Q9NRG0 131 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 SMYD2Q9NRG4 433 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 GTSE1Q9NYZ3 720 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 PSMC3IPQ9P2W1 217 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 ZNF180Q9UJW8 692 aa11.58□□□□□ -0.56
C9orf3-220ENST00000489318 TCF20Q9UGU0 1960 aaKnown RBP11.58□□□□□ -0.56
C9orf3-220ENST00000489318 CKAP5Q14008 2032 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 TSPAN11A1L157 253 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 PRRT4C9JH25 899 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 TIMM44O43615 452 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 LDB2O43679 373 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 SIN3BO75182 1162 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 PGLSO95336 258 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 PDHA1P08559 390 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 TPH1P17752 444 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 NMBRP28336 390 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 SLC6A11P48066 632 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 CCNHP51946 323 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-220ENST00000489318 MGAT5Q09328 741 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 LAMB3Q13751 1172 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 GALNT3Q14435 633 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 POU6F1Q14863 301 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 DLG2Q15700 870 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 PREPLQ4J6C6 727 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-220ENST00000489318 LRRC6Q86X45 466 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 CNTN4Q8IWV2 1026 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 SUGP1Q8IWZ8 645 aaKnown RBP11.57□□□□□ -0.56
C9orf3-220ENST00000489318 SLC25A41Q8N5S1 370 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 OR2A12Q8NGT7 310 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 MZB1Q8WU39 189 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 DCAKDQ8WVC6 231 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 MYLIPQ8WY64 445 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 NXPE3Q969Y0 559 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 MFSD3Q96ES6 412 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 GUCD1Q96NT3 240 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 CDX2Q99626 313 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-220ENST00000489318 C19orf43Q9BQ61 176 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 ADGRE3Q9BY15 652 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 STMN4Q9H169 189 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-220ENST00000489318 TNKS2Q9H2K2 1166 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 ATP13A3Q9H7F0 1226 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 ELOVL2Q9NXB9 296 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 EVLQ9UI08 416 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-220ENST00000489318 SLCO3A1Q9UIG8 710 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 CHKBQ9Y259 395 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 PCDHGC4Q9Y5F7 938 aa11.57□□□□□ -0.56
C9orf3-220ENST00000489318 A0A1W2PQ67 120 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 ANKRD66B4E2M5 251 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 C2CD4DB7Z1M9 353 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 RGS16O15492 202 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-220ENST00000489318 FAM155BO75949 473 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 KCNA5P22460 613 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 ARNTP27540 789 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 SERPINA4P29622 427 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 ATP5DP30049 168 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 NNMTP40261 264 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 SLCO1A2P46721 670 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 KDSRQ06136 332 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 BCL2L1Q07817 233 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 ENPP2Q13822 863 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 SMAD2Q15796 467 aaKnown RBP11.56□□□□□ -0.56
C9orf3-220ENST00000489318 QPCTQ16769 361 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 MYLK3Q32MK0 819 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 TSTD2Q5T7W7 516 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 ARMC12Q5T9G4 340 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 EMC10Q5UCC4 262 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 PDPK2PQ6A1A2 396 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms