RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 GALNT2Q10471 571 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 UGP2Q16851 508 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 RALGPS1Q5JS13 557 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 VSIG1Q86XK7 387 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 DCP2Q8IU60 420 aaKnown RBP14.42□□□□□ -0.1
BRCA1-218ENST00000489037 RHBDD1Q8TEB9 315 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 RAPGEF5Q92565 580 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 FAF2Q96CS3 445 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 NUDCD1Q96RS6 583 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 BAG1Q99933 345 aaPredicted RBP14.42□□□□□ -0.1
BRCA1-218ENST00000489037 FZD3Q9NPG1 666 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 ITM2BQ9Y287 266 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.42□□□□□ -0.1
BRCA1-218ENST00000489037 LRRK1Q38SD2 2015 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 TSPAN11A1L157 253 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 APOL1O14791 398 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 AREL1O15033 823 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 PCDHGA12O60330 932 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 BUB1BO60566 1050 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-218ENST00000489037 MMP20O60882 483 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 ITGAVP06756 1048 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 FECHP22830 423 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 CCNCP24863 283 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 GRK6P43250 576 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 RGRP47804 291 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 SIM1P81133 766 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-218ENST00000489037 TRIP6Q15654 476 aaKnown RBP14.41□□□□□ -0.1
BRCA1-218ENST00000489037 TMEM52BQ4KMG9 183 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 LRRC73Q5JTD7 316 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 PTAR1Q7Z6K3 402 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-218ENST00000489037 KIAA1328Q86T90 577 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 RFX6Q8HWS3 928 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 SPC24Q8NBT2 197 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 TMEM145Q8NBT3 493 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 CCNYQ8ND76 341 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 DENND6BQ8NEG7 585 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 RNF25Q96BH1 459 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-218ENST00000489037 LENG8Q96PV6 779 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-218ENST00000489037 CDC6Q99741 560 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 C1QTNF2Q9BXJ5 285 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 NT5MQ9NPB1 228 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 CA5BQ9Y2D0 317 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 ATP8A1Q9Y2Q0 1164 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 ALG6Q9Y672 507 aa14.41□□□□□ -0.1
BRCA1-218ENST00000489037 RIOK3O14730 519 aaKnown RBP14.4□□□□□ -0.1
BRCA1-218ENST00000489037 MATN3O15232 486 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 PSTPIP1O43586 416 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 LZTS3O60299 673 aaPredicted RBP14.4□□□□□ -0.1
BRCA1-218ENST00000489037 SOCS5O75159 536 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 KRT10P13645 584 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 CES1P23141 567 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 RXRGP48443 463 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 CLDN2P57739 230 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 FAM193AP78312 1265 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 IL9RQ01113 521 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 PRAMEF14Q5SWL7 426 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 Q6ZSR6 202 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 BZW1Q7L1Q6 419 aaKnown RBP14.4□□□□□ -0.1
BRCA1-218ENST00000489037 DAAM2Q86T65 1068 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 NDUFAF2Q8N183 169 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 PQLC3Q8N755 202 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 PDCD6IPQ8WUM4 868 aaKnown RBP14.4□□□□□ -0.1
BRCA1-218ENST00000489037 CAMK1GQ96NX5 476 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 TSGA13Q96PP4 275 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 MGME1Q9BQP7 344 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 WRAP53Q9BUR4 548 aaKnown RBP14.4□□□□□ -0.1
BRCA1-218ENST00000489037 POLR1EQ9GZS1 481 aaKnown RBP14.4□□□□□ -0.1
BRCA1-218ENST00000489037 PCDH12Q9NPG4 1184 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 AMACRQ9UHK6 382 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 GGT7Q9UJ14 662 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 PCOLCE2Q9UKZ9 415 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 HYOU1Q9Y4L1 999 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 HEY1Q9Y5J3 304 aa14.4□□□□□ -0.1
BRCA1-218ENST00000489037 SPAARA0A1B0GVQ0 90 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 PPP1R12AO14974 1030 aaPredicted RBP14.39□□□□□ -0.11
BRCA1-218ENST00000489037 MUSKO15146 869 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 MAP3K6O95382 1288 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 PEX11BO96011 259 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 CA4P22748 312 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 RABIFP47224 123 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 MAXP61244 160 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 GBE1Q04446 702 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 TFDP2Q14188 446 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 FGL2Q14314 439 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 HS1BP3Q53T59 392 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 C11orf63Q6NUN7 778 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 KYAT3Q6YP21 454 aaKnown RBP14.39□□□□□ -0.11
BRCA1-218ENST00000489037 DBX2Q6ZNG2 339 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 GCNT7Q6ZNI0 430 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 ABI3BPQ7Z7G0 1075 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 SPATS2Q86XZ4 545 aaKnown RBP14.39□□□□□ -0.11
BRCA1-218ENST00000489037 CCDC13Q8IYE1 715 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 TEX26Q8N6G2 289 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 OR13H1Q8NG92 308 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 FATE1Q969F0 183 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 VOPP1Q96AW1 172 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 HDAC11Q96DB2 347 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 ECHDC3Q96DC8 303 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 NOD2Q9HC29 1040 aa14.39□□□□□ -0.11
BRCA1-218ENST00000489037 RBM22Q9NW64 420 aaKnown RBP eCLIP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms