RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 TBC1D3Q8IZP1 549 aaPredicted RBP16.1■□□□□ 0.17
HDAC7-224ENST00000488927 C1orf54Q8WWF1 131 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 ATG4AQ8WYN0 398 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 RTP4Q96DX8 246 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 SPATA13Q96N96 652 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 FCRL5Q96RD9 977 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 TMEM121Q9BTD3 319 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 RSPH14Q9UHP6 348 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 RPL26L1Q9UNX3 145 aaKnown RBP16.1■□□□□ 0.17
HDAC7-224ENST00000488927 SMG5Q9UPR3 1016 aaKnown RBP16.1■□□□□ 0.17
HDAC7-224ENST00000488927 DRG1Q9Y295 367 aaKnown RBP16.1■□□□□ 0.17
HDAC7-224ENST00000488927 PCDHGC4Q9Y5F7 938 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 PLXND1Q9Y4D7 1925 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 SHROOM3Q8TF72 1996 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 TTC24A2A3L6 582 aaPredicted RBP16.09■□□□□ 0.17
HDAC7-224ENST00000488927 FAM47DPA6NHR8 397 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 METTL12A8MUP2 240 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 KIF2AO00139 706 aaPredicted RBP16.09■□□□□ 0.17
HDAC7-224ENST00000488927 PLK4O00444 970 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 NEMP1O14524 444 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 GCATO75600 419 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 ANXA9O76027 345 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 PGLSO95336 258 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 CPP00450 1065 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 LMNAP02545 664 aaKnown RBP16.09■□□□□ 0.17
HDAC7-224ENST00000488927 TIMP2P16035 220 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 TNNT3P45378 269 aaPredicted RBP16.09■□□□□ 0.17
HDAC7-224ENST00000488927 CCR5P51681 352 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 SKOR1P84550 965 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 NHLH1Q02575 133 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 LMNB2Q03252 620 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 TRAF2Q12933 501 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 PRPSAP1Q14558 356 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 P3H1Q32P28 736 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 WDR45BQ5MNZ6 344 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 KIAA0895LQ68EN5 471 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 KIAA1161Q6NSJ0 714 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 TRIM69Q86WT6 500 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 TMEFF1Q8IYR6 380 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.09■□□□□ 0.17
HDAC7-224ENST00000488927 FAM71DQ8N9W8 422 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 PDCD6IPQ8WUM4 868 aaKnown RBP16.09■□□□□ 0.17
HDAC7-224ENST00000488927 LRRC45Q96CN5 670 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 MS4A14Q96JA4 679 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 FEM1CQ96JP0 617 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 TDRD1Q9BXT4 1180 aaKnown RBP16.09■□□□□ 0.17
HDAC7-224ENST00000488927 ADGRE3Q9BY15 652 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 GBA3Q9H227 469 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 C10orf88Q9H8K7 445 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 FAM86C1Q9NVL1 165 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.09■□□□□ 0.17
HDAC7-224ENST00000488927 FAM153AQ9UHL3 310 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 PHTF1Q9UMS5 762 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 AAR2Q9Y312 384 aaKnown RBP16.09■□□□□ 0.17
HDAC7-224ENST00000488927 PCDHB9Q9Y5E1 797 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 FADS3Q9Y5Q0 445 aa16.09■□□□□ 0.17
HDAC7-224ENST00000488927 GOLGA6CA6NDK9 693 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 GOLGA6BA6NDN3 693 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 MEI4A8MW99 385 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 AREL1O15033 823 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 FZD6O60353 706 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 MMP2P08253 660 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 GOLGA6DP0CG33 693 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 NFKB1P19838 968 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 CD68P34810 354 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-224ENST00000488927 PAFAH1B1P43034 410 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 DHPSP49366 369 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-224ENST00000488927 EPHB1P54762 984 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 TAS2R38P59533 333 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 MPP3Q13368 585 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 LYSMD4Q5XG99 296 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 SYT10Q6XYQ8 523 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 ARHGEF18Q6ZSZ5 1173 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 PRPF39Q86UA1 669 aaKnown RBP16.08■□□□□ 0.16
HDAC7-224ENST00000488927 PRELID2Q8N945 189 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 CCDC89Q8N998 374 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 C12orf50Q8NA57 414 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-224ENST00000488927 TADA1Q96BN2 335 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 NSMCE3Q96MG7 304 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 HSPA12BQ96MM6 686 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 RBM15Q96T37 977 aaKnown RBP eCLIP16.08■□□□□ 0.16
HDAC7-224ENST00000488927 C6orf106Q9H6K1 298 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-224ENST00000488927 PCDH9Q9HC56 1237 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 GOLGA6AQ9NYA3 693 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 FEZ2Q9UHY8 353 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-224ENST00000488927 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-224ENST00000488927 PCDHGA5Q9Y5G8 931 aa16.08■□□□□ 0.16
HDAC7-224ENST00000488927 FANCMQ8IYD8 2048 aa16.07■□□□□ 0.16
HDAC7-224ENST00000488927 RIOK3O14730 519 aaKnown RBP16.07■□□□□ 0.16
HDAC7-224ENST00000488927 ZNF185O15231 689 aa16.07■□□□□ 0.16
HDAC7-224ENST00000488927 PCDH8O95206 1070 aa16.07■□□□□ 0.16
HDAC7-224ENST00000488927 EPOP01588 193 aa16.07■□□□□ 0.16
HDAC7-224ENST00000488927 HOXD12P35452 270 aa16.07■□□□□ 0.16
HDAC7-224ENST00000488927 ABL2P42684 1182 aa16.07■□□□□ 0.16
HDAC7-224ENST00000488927 GEMP55040 296 aa16.07■□□□□ 0.16
HDAC7-224ENST00000488927 RPS21P63220 83 aaKnown RBP16.07■□□□□ 0.16
HDAC7-224ENST00000488927 SNX1Q13596 522 aa16.07■□□□□ 0.16
HDAC7-224ENST00000488927 CYP1B1Q16678 543 aa16.07■□□□□ 0.16
HDAC7-224ENST00000488927 PARP6Q2NL67 630 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms