RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 FAM170BA6NMN3 283 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 TRAFD1O14545 582 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-242ENST00000488013 DCXO43602 365 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 BNIP3LO60238 219 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 RNF40O75150 1001 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 SIN3BO75182 1162 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 ALDH1A2O94788 518 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 KLF8O95600 359 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-242ENST00000488013 TTC4O95801 387 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 HOXB2P14652 356 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 C5AR1P21730 350 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 XPAP23025 273 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-242ENST00000488013 PRKCHP24723 683 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 ITGB7P26010 798 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 RGRP47804 291 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 CARSP49589 748 aaKnown RBP11.13□□□□□ -0.63
HDLBP-242ENST00000488013 NUMBP49757 651 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 SEC13P55735 322 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 UBXN2BQ14CS0 331 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 ELF2Q15723 593 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 SLC1A5Q15758 541 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 EMC10Q5UCC4 262 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 ZNF776Q68DI1 518 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-242ENST00000488013 ERAP2Q6P179 960 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 ZDHHC24Q6UX98 284 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 USP45Q70EL2 814 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 SYT13Q7L8C5 426 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 RAVER1Q8IY67 606 aaKnown RBP11.13□□□□□ -0.63
HDLBP-242ENST00000488013 TAB3Q8N5C8 712 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-242ENST00000488013 TXNDC5Q8NBS9 432 aaKnown RBP11.13□□□□□ -0.63
HDLBP-242ENST00000488013 EDAQ92838 391 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 RMDN1Q96DB5 314 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 TTC25Q96NG3 672 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 SERPINB12Q96P63 405 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 TRIB3Q96RU7 358 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 UHRF1Q96T88 793 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-242ENST00000488013 FICDQ9BVA6 458 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 RSPH9Q9H1X1 276 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-242ENST00000488013 TBC1D17Q9HA65 648 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 LMAN1LQ9HAT1 526 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 UBP1Q9NZI7 540 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 SAMD15Q9P1V8 674 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 MUTYHQ9UIF7 546 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 MMP17Q9ULZ9 603 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 NFU1Q9UMS0 254 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 NDRG2Q9UN36 371 aaKnown RBP11.13□□□□□ -0.63
HDLBP-242ENST00000488013 PCDHB9Q9Y5E1 797 aa11.13□□□□□ -0.63
HDLBP-242ENST00000488013 F5P12259 2224 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 HEATR9A2RTY3 570 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 KRBA1A5PL33 1030 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 SHISA7A6NL88 538 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 ANKRD66B4E2M5 251 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 E7ESA3 106 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 FZD6O60353 706 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 SPAG6O75602 509 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 LEFTY1O75610 366 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 TMEM63AO94886 807 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 CRTAMO95727 393 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 CPP00450 1065 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 AGTP01019 485 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 IL1BP01584 269 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 UGT2B4P06133 528 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 GSTA2P09210 222 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 CYP2A6P11509 494 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-242ENST00000488013 HLA-EP13747 358 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 TSHRP16473 764 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 TARSP26639 723 aaKnown RBP11.12□□□□□ -0.63
HDLBP-242ENST00000488013 MAGEA3P43357 314 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 PCSK7Q16549 785 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 TTC31Q49AM3 519 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-242ENST00000488013 ARSIQ5FYB1 569 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 PCID2Q5JVF3 399 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 SPDYCQ5MJ68 293 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 ANKRD22Q5VYY1 191 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 ZDHHC20Q5W0Z9 365 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 TRMT10CQ7L0Y3 403 aaKnown RBP11.12□□□□□ -0.63
HDLBP-242ENST00000488013 CAMK1DQ8IU85 385 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 ZNF687Q8N1G0 1237 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 STK40Q8N2I9 435 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.12□□□□□ -0.63
HDLBP-242ENST00000488013 RPLP0P6Q8NHW5 317 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 GABPB2Q8TAK5 448 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-242ENST00000488013 BRSK1Q8TDC3 778 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 PDCD6IPQ8WUM4 868 aaKnown RBP11.12□□□□□ -0.63
HDLBP-242ENST00000488013 HNRNPLLQ8WVV9 542 aaKnown RBP11.12□□□□□ -0.63
HDLBP-242ENST00000488013 EZH1Q92800 747 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-242ENST00000488013 CLDN23Q96B33 292 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 PKNOX2Q96KN3 472 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 RANBP9Q96S59 729 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 LYSMD1Q96S90 227 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 GORASP1Q9BQQ3 440 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 HDAC8Q9BY41 377 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 MFSD1Q9H3U5 465 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 MRM3Q9HC36 420 aaKnown RBP11.12□□□□□ -0.63
HDLBP-242ENST00000488013 MAGEE1Q9HCI5 957 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.12□□□□□ -0.63
HDLBP-242ENST00000488013 HCN2Q9UL51 889 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 PPIL1Q9Y3C6 166 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 SIT1Q9Y3P8 196 aa11.12□□□□□ -0.63
HDLBP-242ENST00000488013 PCDHGC4Q9Y5F7 938 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms