RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 NSMCE4AQ9NXX6 385 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 GGT7Q9UJ14 662 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 RIMKLBQ9ULI2 386 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 GRID1Q9ULK0 1009 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 WNT6Q9Y6F9 365 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 REV3LO60673 3130 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 SLC9A3R1O14745 358 aaPredicted RBP9.51□□□□□ -0.89
SF3B1-211ENST00000487698 SMAD6O43541 496 aaKnown RBP9.51□□□□□ -0.89
SF3B1-211ENST00000487698 ZNF821O75541 412 aaPredicted RBP9.51□□□□□ -0.89
SF3B1-211ENST00000487698 FAM107AO95990 144 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 DHRS4L1P0CG22 281 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 TYRP14679 529 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 PAMP19021 973 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 ETV4P43268 484 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 CSNK1DP48730 415 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 SLC20A2Q08357 652 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 LY6G5CQ5SRR4 150 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 ATXN7L2Q5T6C5 722 aaPredicted RBP9.51□□□□□ -0.89
SF3B1-211ENST00000487698 KIAA0907Q7Z7F0 614 aaPredicted RBP9.51□□□□□ -0.89
SF3B1-211ENST00000487698 SRLQ86TD4 932 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.51□□□□□ -0.89
SF3B1-211ENST00000487698 ZNF557Q8N988 423 aaPredicted RBP9.51□□□□□ -0.89
SF3B1-211ENST00000487698 GDAP1Q8TB36 358 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 BCAS4Q8TDM0 211 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 ACMSDQ8TDX5 336 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 CHMP6Q96FZ7 201 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 TXNDC16Q9P2K2 825 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 CHKBQ9Y259 395 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 HS3ST2Q9Y278 367 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 RAI2Q9Y5P3 530 aa9.51□□□□□ -0.89
SF3B1-211ENST00000487698 GOLGA8TH3BQL2 631 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 RFXAPO00287 272 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 TPP1O14773 563 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 FZD6O60353 706 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 PRKCGP05129 697 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 PDHA1P08559 390 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 PSMA3P25788 255 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 GABRB3P28472 473 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 SPRP35270 261 aaPredicted RBP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 CTSOP43234 321 aaPredicted RBP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 CSRP3P50461 194 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 LAMB3Q13751 1172 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 RARS2Q5T160 578 aaKnown RBP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 CDHR3Q6ZTQ4 885 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 GPR149Q86SP6 731 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 ZC3HC1Q86WB0 502 aaKnown RBP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 BRSK1Q8TDC3 778 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 DYDC1Q8WWB3 177 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 VOPP1Q96AW1 172 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 MAGEB18Q96M61 343 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 ASB16Q96NS5 453 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 SRPK1Q96SB4 655 aaKnown RBP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 CCT8L2Q96SF2 557 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 FAM167BQ9BTA0 163 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 SLC17A7Q9P2U7 560 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 GGA2Q9UJY4 613 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 PCDHGC4Q9Y5F7 938 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 SPO11Q9Y5K1 396 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 MUC22E2RYF6 1773 aaPredicted RBP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 COPEO14579 308 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 SLC7A4O43246 635 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 TIMM44O43615 452 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 CYP17A1P05093 508 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 F7P08709 466 aaPredicted RBP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 PABPC1P11940 636 aaKnown RBP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 SRCP12931 536 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 DRD4P21917 467 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 FSHRP23945 695 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 FOXN2P32314 431 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 BMP8BP34820 402 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 SLC1A2P43004 574 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 ARSDP51689 593 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 ZNF140P52738 457 aaPredicted RBP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 IL9RQ01113 521 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 HYAL1Q12794 435 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 DMC1Q14565 340 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 FAM78AQ5JUQ0 283 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 FSTL4Q6MZW2 842 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 LVRNQ6Q4G3 990 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 RGS9BPQ6ZS82 235 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 DCLK2Q8N568 766 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 EFHBQ8N7U6 833 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 C2CD4AQ8NCU7 369 aaPredicted RBP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 BLOC1S5Q8TDH9 187 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 FGF13Q92913 245 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 PPP2R3CQ969Q6 453 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 ISG20Q96AZ6 181 aaKnown RBP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 VPS39Q96JC1 886 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 GPR22Q99680 433 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 SLC2A11Q9BYW1 496 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 C12orf65Q9H3J6 166 aaKnown RBP9.5□□□□□ -0.89
SF3B1-211ENST00000487698 RHOJQ9H4E5 214 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 RABEP2Q9H5N1 569 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 PCMTD2Q9NV79 361 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 FBXO10Q9UK96 956 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 KCTD3Q9Y597 815 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 ARL5AQ9Y689 179 aa9.5□□□□□ -0.89
SF3B1-211ENST00000487698 ANKRD66B4E2M5 251 aa9.49□□□□□ -0.89
SF3B1-211ENST00000487698 LINC01565O15544 149 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms