RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 COILP38432 576 aaPredicted RBP19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 KCNJ1P48048 391 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 FNTAP49354 379 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 ADPRHP54922 357 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 TAS2R38P59533 333 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 MPP3Q13368 585 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 PARP6Q2NL67 630 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 NEK5Q6P3R8 708 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 TTC7BQ86TV6 843 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 ZSWIM9Q86XI8 627 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 OR14C36Q8NHC7 312 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 SPATA22Q8NHS9 363 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 ZC3H10Q96K80 434 aaKnown RBP19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 FAM153AQ9UHL3 310 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 INVSQ9Y283 1065 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 PCDHB9Q9Y5E1 797 aa19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 LRRC72A6NJI9 287 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 UPK3BL1B0FP48 263 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 UPK3BL2E5RIL1 263 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 CCDC188H7C350 402 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 AREL1O15033 823 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 ANXA9O76027 345 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 SEMA4FO95754 770 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 MT-CYBP00156 380 aaPredicted RBP19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 PRLP01236 227 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 BCKDHBP21953 392 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 ACTN2P35609 894 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 ABL2P42684 1182 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 RPL26P61254 145 aaKnown RBP19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 SRSF5Q13243 272 aaKnown RBP19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 PRPSAP1Q14558 356 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 TTC27Q6P3X3 843 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 CCDC137Q6PK04 289 aaKnown RBP19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 C4orf22Q6V702 233 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 ARHGEF18Q6ZSZ5 1173 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 FAM124AQ86V42 546 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 CADM4Q8NFZ8 388 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 OR2T34Q8NGX1 318 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 PIH1D2Q8WWB5 315 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 OXNAD1Q96HP4 312 aaPredicted RBP19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 DUSP15Q9H1R2 295 aaPredicted RBP19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 PCDH9Q9HC56 1237 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 PREBQ9HCU5 417 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 PAK5Q9P286 719 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 CDC23Q9UJX2 597 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 TPX2Q9ULW0 747 aaKnown RBP19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 RPL26L1Q9UNX3 145 aaKnown RBP19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 AAR2Q9Y312 384 aaKnown RBP19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 FADS3Q9Y5Q0 445 aa19.52■□□□□ 0.72
PCOLCE-208ENST00000487172 MAP3K13O43283 966 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 NDUFS2O75306 463 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 IFNB1P01574 187 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 EPOP01588 193 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 PDHA1P08559 390 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 NFKBIAP25963 317 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 PSMB4P28070 264 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 GEMP55040 296 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 ELP6Q0PNE2 266 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 TUBB2AQ13885 445 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 PLK5Q496M5 336 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 KDELC1Q6UW63 502 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 NDUFAF2Q8N183 169 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 CCDC89Q8N998 374 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 KIF18AQ8NI77 898 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 PDCD6IPQ8WUM4 868 aaKnown RBP19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 TRIB3Q96RU7 358 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 GORASP1Q9BQQ3 440 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 TUBB2BQ9BVA1 445 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 GPR174Q9BXC1 333 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 CHKBQ9Y259 395 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 R4GN57 208 aa19.51■□□□□ 0.71
PCOLCE-208ENST00000487172 LOC285095A0A1B0GVY8 99 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 GOLGA6CA6NDK9 693 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 GOLGA6BA6NDN3 693 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 RIOK3O14730 519 aaKnown RBP19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 TSPAN6O43657 245 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 METTL18O95568 372 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 CPP00450 1065 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 GOLGA6DP0CG33 693 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 XPAP23025 273 aaPredicted RBP19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 DEKP35659 375 aaKnown RBP19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 RPL6Q02878 288 aaKnown RBP19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 CDK18Q07002 472 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 SIM2Q14190 667 aaPredicted RBP19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 CEP68Q76N32 757 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 GSTA5Q7RTV2 222 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 GRK7Q8WTQ7 553 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 ZNF592Q92610 1267 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 ATOH1Q92858 354 aaPredicted RBP19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 SCRN2Q96FV2 425 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 FEM1CQ96JP0 617 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 MRGPRX2Q96LB1 330 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 RUNDC3BQ96NL0 473 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 ADGRE3Q9BY15 652 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 EPC1Q9H2F5 836 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 SEMA4AQ9H3S1 761 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 GOLGA6AQ9NYA3 693 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 UBP1Q9NZI7 540 aa19.5■□□□□ 0.71
PCOLCE-208ENST00000487172 PCYOX1Q9UHG3 505 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms