RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 WDR83Q9BRX9 315 aaKnown RBP5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 POLR1BQ9H9Y6 1135 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 RNF146Q9NTX7 359 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 NSMCE4AQ9NXX6 385 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 EHD2Q9NZN4 543 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 ZNF70Q9UC06 446 aaPredicted RBP5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 ADD3Q9UEY8 706 aaKnown RBP5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 NRBP1Q9UHY1 535 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 FAM96BQ9Y3D0 163 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 AKNAQ7Z591 1439 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 YEATS2Q9ULM3 1422 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 MED1Q15648 1581 aaPredicted RBP5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 DENND4BO75064 1496 aaPredicted RBP5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 IQSEC2Q5JU85 1478 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 A0A096LPK6 155 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 TYW5A2RUC4 315 aaKnown RBP5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 EIF3CLB5ME19 914 aaKnown RBP5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 TAF4O00268 1085 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 EBAG9O00559 213 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 ADAM10O14672 748 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 AHCYL1O43865 530 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 PAGE4O60829 102 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 TOP3BO95985 862 aaKnown RBP5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 CTPS1P17812 591 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 TNFSF8P32971 234 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 CEBPZQ03701 1054 aaKnown RBP5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 CUL4AQ13619 759 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 DPCR1Q3MIW9 517 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 C6orf10Q5SRN2 563 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 LRRC8EQ6NSJ5 796 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 NCEH1Q6PIU2 408 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 TSSK4Q6SA08 328 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 TDRPQ86YL5 185 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 GPSM1Q86YR5 675 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 FAM217AQ8IXS0 508 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 WDTC1Q8N5D0 677 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 HORMAD2Q8N7B1 307 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 SLC44A5Q8NCS7 719 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 PSPC1Q8WXF1 523 aaKnown RBP5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 ARHGEF2Q92974 986 aaKnown RBP5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 GTF3C6Q969F1 213 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 FAM149B1Q96BN6 582 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 PABPC5Q96DU9 382 aaKnown RBP5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 YME1L1Q96TA2 773 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 SEMA4CQ9C0C4 833 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 B3GNT4Q9C0J1 378 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 CCDC68Q9H2F9 335 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 SYNCQ9H7C4 482 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 SEL1LQ9UBV2 794 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 HAO1Q9UJM8 370 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 ZNF215Q9UL58 517 aaPredicted RBP5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 CARD8Q9Y2G2 431 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 ADAM18Q9Y3Q7 739 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 SLC4A4Q9Y6R1 1079 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 SAMD9Q5K651 1589 aa5.2□□□□□ -1.58
PRPF38A-203ENST00000487160 A0A0G2JK05 382 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 A6NNC1 897 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 KCNU1A8MYU2 1149 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 USP17L23D6RBM5 183 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 NPIPB11E5RHQ5 1161 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 VILLO15195 856 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 FIBPO43427 364 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 TLR2O60603 784 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 HNRNPCL1O60812 293 aaKnown RBP5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 TFP02787 698 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 HSP90AA1P07900 732 aaKnown RBP5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 CHRNB1P11230 501 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 CYP19A1P11511 503 aaPredicted RBP5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 TM4SF1P30408 202 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 PTGER1P34995 402 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 PPARGP37231 505 aaPredicted RBP5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 GPR12P47775 334 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 PIP4K2AP48426 406 aaPredicted RBP5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 CLCN5P51795 746 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 HDAC4P56524 1084 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 MC1RQ01726 317 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 CREB5Q02930 508 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 GOLGA8DPQ0D2H9 430 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 GRIK3Q13003 919 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 ALG11Q2TAA5 492 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 RILPL1Q5EBL4 403 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 ASPHD1Q5U4P2 390 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 CES5AQ6NT32 575 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 TMEM71Q6P5X7 295 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 KLHL35Q6PF15 583 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 SLC2A7Q6PXP3 512 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 DEF8Q6ZN54 512 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 PRIMA1Q86XR5 153 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 ZDHHC23Q8IYP9 409 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 KDM1BQ8NB78 822 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 SCFD2Q8WU76 684 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 NSUN4Q96CB9 384 aaKnown RBP5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 RNF183Q96D59 192 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 MSI2Q96DH6 328 aaKnown RBP5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 MAP7D2Q96T17 732 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 CENPOQ9BU64 300 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 STRA6Q9BX79 667 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 PRSS22Q9GZN4 317 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 PLEKHA4Q9H4M7 779 aa5.19□□□□□ -1.58
PRPF38A-203ENST00000487160 MVB12BQ9H7P6 319 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms