RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 THAP2Q9H0W7 228 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 SP110Q9HB58 689 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 IFNKQ9P0W0 207 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 CSNK1G3Q9Y6M4 447 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 A0A087X0T9 212 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 DFFAO00273 331 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 FFAR2O15552 330 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 BUB1BO60566 1050 aaPredicted RBP19.27■□□□□ 0.68
CLIP2-206ENST00000487091 FAM228BP0C875 321 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 IGFALSP35858 605 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 ARL4AP40617 200 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 DAB2P98082 770 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 ZSCAN23Q3MJ62 389 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 ZNF542PQ5EBM4 170 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 CFAP58Q5T655 872 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 POLNQ7Z5Q5 900 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 TEKT4Q8WW24 435 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 ZNF599Q96NL3 588 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 CINPQ9BW66 212 aaPredicted RBP19.27■□□□□ 0.68
CLIP2-206ENST00000487091 ATP13A3Q9H7F0 1226 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 IP6K2Q9UHH9 426 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 FAM208BQ5VWN6 2430 aa19.27■□□□□ 0.68
CLIP2-206ENST00000487091 RIOK3O14730 519 aaKnown RBP19.26■□□□□ 0.67
CLIP2-206ENST00000487091 GYPCP04921 128 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 CYP1A2P05177 515 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 RARAP10276 462 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 CKMT1AP12532 417 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 SERPINA4P29622 427 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 RGRP47804 291 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 RENBPP51606 427 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 CYP4F3Q08477 520 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 EIF2B5Q13144 721 aaKnown RBP19.26■□□□□ 0.67
CLIP2-206ENST00000487091 SMTNL2Q2TAL5 461 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 TPRG1LQ5T0D9 272 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 HES3Q5TGS1 186 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 ERAP2Q6P179 960 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 ALKBH5Q6P6C2 394 aaKnown RBP19.26■□□□□ 0.67
CLIP2-206ENST00000487091 ARHGAP36Q6ZRI8 547 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 CAMK1DQ8IU85 385 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 TP53I13Q8NBR0 393 aaPredicted RBP19.26■□□□□ 0.67
CLIP2-206ENST00000487091 ZNF548Q8NEK5 533 aaPredicted RBP19.26■□□□□ 0.67
CLIP2-206ENST00000487091 BTN2A2Q8WVV5 523 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 TBATAQ96M53 351 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 WRAP53Q9BUR4 548 aaKnown RBP19.26■□□□□ 0.67
CLIP2-206ENST00000487091 CAAP1Q9H8G2 361 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 USP29Q9HBJ7 922 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 PCDH12Q9NPG4 1184 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 KLF15Q9UIH9 416 aa19.26■□□□□ 0.67
CLIP2-206ENST00000487091 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.26■□□□□ 0.67
CLIP2-206ENST00000487091 URB1O60287 2271 aaKnown RBP19.26■□□□□ 0.67
CLIP2-206ENST00000487091 MYLKQ15746 1914 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 LRRK1Q38SD2 2015 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 CFAP69A5D8W1 941 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 K7ESM1 405 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 TPM3P06753 285 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 TCF4P15884 667 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 JUNDP17535 347 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 DUSP3P51452 185 aaPredicted RBP19.25■□□□□ 0.67
CLIP2-206ENST00000487091 THOP1P52888 689 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 TARDBPQ13148 414 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLIP2-206ENST00000487091 AGERQ15109 404 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 NFKBIBQ15653 356 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 SKOR2Q2VWA4 1001 aaPredicted RBP19.25■□□□□ 0.67
CLIP2-206ENST00000487091 TMCO4Q5TGY1 634 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 TMCO3Q6UWJ1 677 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 HSPH1Q92598 858 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 ECHDC3Q96DC8 303 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 APOLD1Q96LR9 279 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 CSPG4P5Q96PW8 444 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 PSKH2Q96QS6 385 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 NUP85Q9BW27 656 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 MBNL1Q9NR56 388 aaKnown RBP19.25■□□□□ 0.67
CLIP2-206ENST00000487091 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLIP2-206ENST00000487091 EVA1BQ9NVM1 165 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 SEPT3Q9UH03 358 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 ANAPC7Q9UJX3 599 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 ATP8A1Q9Y2Q0 1164 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 ANKRD36A6QL64 1941 aa19.25■□□□□ 0.67
CLIP2-206ENST00000487091 MYO1FO00160 1098 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 AQP9O43315 295 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 AMPD1P23109 780 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 HNRNPH3P31942 346 aaKnown RBP19.24■□□□□ 0.67
CLIP2-206ENST00000487091 PEX5P50542 639 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 CLDN6P56747 220 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 AP1S1P61966 158 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 INSM1Q01101 510 aaPredicted RBP19.24■□□□□ 0.67
CLIP2-206ENST00000487091 BCL2L1Q07817 233 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 LBRQ14739 615 aaKnown RBP19.24■□□□□ 0.67
CLIP2-206ENST00000487091 LRRC14Q15048 493 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 CCDC122Q5T0U0 273 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 KDM7AQ6ZMT4 941 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 MACC1Q6ZN28 852 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 ZSWIM9Q86XI8 627 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 TP53INP2Q8IXH6 220 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 SPASTQ9UBP0 616 aa19.24■□□□□ 0.67
CLIP2-206ENST00000487091 DSPP15924 2871 aaKnown RBP19.23■□□□□ 0.67
CLIP2-206ENST00000487091 ZFHX4Q86UP3 3567 aa19.23■□□□□ 0.67
CLIP2-206ENST00000487091 TMEM110-MUSTN1A8MSY1 372 aa19.23■□□□□ 0.67
CLIP2-206ENST00000487091 TPP1O14773 563 aa19.23■□□□□ 0.67
CLIP2-206ENST00000487091 NEBLO76041 1014 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms