RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	ASCL5	Q7RTU5	278 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	MIER3	Q7Z3K6	550 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	MRPL10	Q7Z7H8	261 aa	Known RBP	4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	EXOC8	Q8IYI6	725 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	FAM177A1	Q8N128	213 aa	Predicted RBP	4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	C12orf76	Q8N812	135 aa	Predicted RBP	4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	ABHD11	Q8NFV4	315 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	C16orf52	Q8NHV5	167 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	ZNF398	Q8TD17	642 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	ZNF668	Q96K58	619 aa	Predicted RBP	4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	MBOAT7	Q96N66	472 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CAMK1G	Q96NX5	476 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	KLHL5	Q96PQ7	755 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	JPH2	Q9BR39	696 aa	Predicted RBP	4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	EFHD1	Q9BUP0	239 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	TEKT3	Q9BXF9	490 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	RNF26	Q9BY78	433 aa	Predicted RBP	4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	AGXT2	Q9BYV1	514 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	RHOBTB2	Q9BYZ6	727 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CIPC	Q9C0C6	399 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	UNC45A	Q9H3U1	944 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	MFSD1	Q9H3U5	465 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	EBF3	Q9H4W6	596 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	SFXN1	Q9H9B4	322 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	IGSF9	Q9P2J2	1179 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	LPAR3	Q9UBY5	353 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CDH22	Q9UJ99	828 aa		4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	TPR	P12270	2363 aa	Known RBP	4.37	□□□□□ -1.71
SNRNP40-205	ENST00000486941	ASAP2	O43150	1006 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CHMP2A	O43633	222 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	DKC1	O60832	514 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CNP	P09543	421 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CPA1	P15085	419 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	KLRC2	P26717	231 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	PSMA5	P28066	241 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	PDIA3	P30101	505 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	HSPA4	P34932	840 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	SLC11A1	P49279	550 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CLCN4	P51793	760 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	DGKE	P52429	567 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	NLRP5	P59047	1200 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	PSMC5	P62195	406 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	PTPN14	Q15678	1187 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	LETM2	Q2VYF4	491 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	PTCHD3	Q3KNS1	767 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	KHDC1L	Q5JSQ8	128 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	PXDC1	Q5TGL8	231 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	GALNT17	Q6IS24	598 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	BLOC1S2	Q6QNY1	142 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CCDC149	Q6ZUS6	474 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	ANO5	Q75V66	913 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CATSPER4	Q7RTX7	472 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	SRGAP1	Q7Z6B7	1085 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	TMEM173	Q86WV6	379 aa	Predicted RBP	4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	RHPN2	Q8IUC4	686 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	SLC15A3	Q8IY34	581 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CCDC105	Q8IYK2	499 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CNNM3	Q8NE01	707 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CMAS	Q8NFW8	434 aa	Predicted RBP	4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	ETNPPL	Q8TBG4	499 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	URGCP	Q8TCY9	931 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	TBCK	Q8TEA7	893 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	HDAC7	Q8WUI4	952 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	PHKB	Q93100	1093 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	MVB12A	Q96EY5	273 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	RTP3	Q9BQQ7	232 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	TMEM175	Q9BSA9	504 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	VN1R3	Q9BXE9	311 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	SLC26A6	Q9BXS9	759 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	ADGRE3	Q9BY15	652 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	UBN1	Q9NPG3	1134 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	MRPL17	Q9NRX2	175 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	AGPAT5	Q9NUQ2	364 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	VPS54	Q9P1Q0	977 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	WNT16	Q9UBV4	365 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	DNAJB4	Q9UDY4	337 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	DUSP12	Q9UNI6	340 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	PIN4	Q9Y237	131 aa	Known RBP	4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	PCDHB2	Q9Y5E7	798 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CNTNAP2	Q9UHC6	1331 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	TRIP11	Q15643	1979 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	F5	P12259	2224 aa		4.36	□□□□□ -1.71
SNRNP40-205	ENST00000486941	ARID2	Q68CP9	1835 aa		4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	MIA3	Q5JRA6	1907 aa		4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	TMEM150B	A6NC51	233 aa		4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	SOCS2	O14508	198 aa		4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	INPPL1	O15357	1258 aa		4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	PI15	O43692	258 aa		4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	DDHD2	O94830	711 aa		4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	TDP2	O95551	362 aa		4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	NCL	P19338	710 aa	Known RBP	4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	RPS6KB1	P23443	525 aa		4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CCND1	P24385	295 aa		4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	TKT	P29401	623 aa	Known RBP	4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	AXL	P30530	894 aa		4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	HOXA11	P31270	313 aa	Predicted RBP	4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	CCKAR	P32238	428 aa		4.35	□□□□□ -1.71
SNRNP40-205	ENST00000486941	QARS	P47897	775 aa	Known RBP	4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms