RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 NDST3O95803 873 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 AGTP01019 485 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 PDHA1P08559 390 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 ALADP13716 330 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 AOC1P19801 751 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 HLA-DPA1P20036 260 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 ITGB7P26010 798 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 GRIA1P42261 906 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 MAGEA9P43362 315 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 CHRNA4P43681 627 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 GRIA4P48058 902 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 TERF1P54274 439 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 RPL26P61254 145 aaKnown RBP9.65□□□□□ -0.86
MCF2L-227ENST00000486806 SATB1Q01826 763 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 CALCOCO2Q13137 446 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 CBLBQ13191 982 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 MSLNQ13421 630 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-227ENST00000486806 CUL1Q13616 776 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 GALNT3Q14435 633 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 SPARCL1Q14515 664 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 SLC1A5Q15758 541 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 CST6Q15828 149 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 ERCC6LQ2NKX8 1250 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 ZNF805Q5CZA5 627 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 ARSIQ5FYB1 569 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 SIRPB2Q5JXA9 342 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 ARMC12Q5T9G4 340 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 ZNF776Q68DI1 518 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-227ENST00000486806 NAPEPLDQ6IQ20 393 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 LRRC8BQ6P9F7 803 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 BRAT1Q6PJG6 821 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 PARS2Q7L3T8 475 aaKnown RBP9.65□□□□□ -0.86
MCF2L-227ENST00000486806 DSG4Q86SJ6 1040 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 CAND1Q86VP6 1230 aaKnown RBP9.65□□□□□ -0.86
MCF2L-227ENST00000486806 MMAAQ8IVH4 418 aaKnown RBP9.65□□□□□ -0.86
MCF2L-227ENST00000486806 ZCCHC9Q8N567 271 aaKnown RBP9.65□□□□□ -0.86
MCF2L-227ENST00000486806 EIF1ADQ8N9N8 165 aaKnown RBP9.65□□□□□ -0.86
MCF2L-227ENST00000486806 FLCNQ8NFG4 579 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 FBXO25Q8TCJ0 367 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 HCAR2Q8TDS4 363 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 PIH1D2Q8WWB5 315 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 UBXN4Q92575 508 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 ARRDC3Q96B67 414 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 KLHL32Q96NJ5 620 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 MCCC1Q96RQ3 725 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-227ENST00000486806 HINFPQ9BQA5 517 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 NEUROG2Q9H2A3 272 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 CASS4Q9NQ75 786 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 RPL26L1Q9UNX3 145 aaKnown RBP9.65□□□□□ -0.86
MCF2L-227ENST00000486806 CHKBQ9Y259 395 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 SIT1Q9Y3P8 196 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 A0A1W2PQ67 120 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 TCRBV21S2A2A0A5A6 115 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 TMEM221A6NGB7 291 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 M0R296 226 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 SPINT1O43278 529 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 PPFIA2O75334 1257 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 PAPSS2O95340 614 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-227ENST00000486806 ADH1BP00325 375 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 CPP00450 1065 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 IL1BP01584 269 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 FGF1P05230 155 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 DCNP07585 359 aaKnown RBP9.64□□□□□ -0.87
MCF2L-227ENST00000486806 MLNP12872 115 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 GABRG2P18507 467 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 NDUFV2P19404 249 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 DRD3P35462 400 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 PSMD8P48556 350 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 LMAN1P49257 510 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 CARSP49589 748 aaKnown RBP9.64□□□□□ -0.87
MCF2L-227ENST00000486806 DGKEP52429 567 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 RPS14P62263 151 aaKnown RBP9.64□□□□□ -0.87
MCF2L-227ENST00000486806 CAV1Q03135 178 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 ZBTB16Q05516 673 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 CDH17Q12864 832 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 MTAPQ13126 283 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 NAA30Q147X3 362 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-227ENST00000486806 QPCTQ16769 361 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 FAM46CQ5VWP2 391 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 WDR93Q6P2C0 686 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 MAMSTRQ6ZN01 415 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 LINC00523Q86TU6 105 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 IFT20Q8IY31 132 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 AGGF1Q8N302 714 aaeCLIP9.64□□□□□ -0.873e-8■□□□□ 8.9
MCF2L-227ENST00000486806 SPEM1Q8N4L4 309 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 AADATQ8N5Z0 425 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 LPCAT1Q8NF37 534 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 MYRIPQ8NFW9 859 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 OR52K1Q8NGK4 314 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 ERLEC1Q96DZ1 483 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 IFT43Q96FT9 208 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 PPP1R16AQ96I34 528 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 MRGPRX1Q96LB2 322 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 LYSMD1Q96S90 227 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 APOL2Q9BQE5 337 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 WDR83Q9BRX9 315 aaKnown RBP9.64□□□□□ -0.87
MCF2L-227ENST00000486806 ADGRE3Q9BY15 652 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 HDAC8Q9BY41 377 aa9.64□□□□□ -0.87
MCF2L-227ENST00000486806 FRMD8Q9BZ67 464 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-227ENST00000486806 PHACTR1Q9C0D0 580 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms