RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 GEMP55040 296 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 RPL6Q02878 288 aaKnown RBP11.49□□□□□ -0.57
NUP50-216ENST00000486184 NIPAL4Q0D2K0 466 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 ELP6Q0PNE2 266 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 PCSK7Q16549 785 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 MAP7D1Q3KQU3 841 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 CCDC137Q6PK04 289 aaKnown RBP11.49□□□□□ -0.57
NUP50-216ENST00000486184 PRR23BQ6ZRT6 265 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 PARS2Q7L3T8 475 aaKnown RBP11.49□□□□□ -0.57
NUP50-216ENST00000486184 TTC7BQ86TV6 843 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 CREG2Q8IUH2 290 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 C12orf50Q8NA57 414 aaPredicted RBP11.49□□□□□ -0.57
NUP50-216ENST00000486184 PRSS33Q8NF86 280 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 ATL2Q8NHH9 583 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 ARRDC2Q8TBH0 407 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 ATOH1Q92858 354 aaPredicted RBP11.49□□□□□ -0.57
NUP50-216ENST00000486184 RAB7BQ96AH8 199 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 IMP4Q96G21 291 aaKnown RBP11.49□□□□□ -0.57
NUP50-216ENST00000486184 TOE1Q96GM8 510 aaKnown RBP11.49□□□□□ -0.57
NUP50-216ENST00000486184 RUNDC3BQ96NL0 473 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 FCRL5Q96RD9 977 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 FSD1LQ9BXM9 530 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 ADGRE3Q9BY15 652 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 NEUROG2Q9H2A3 272 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 USP29Q9HBJ7 922 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 CD93Q9NPY3 652 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 VPS45Q9NRW7 570 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 DKK3Q9UBP4 350 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 FAM153AQ9UHL3 310 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 RAB23Q9ULC3 237 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 AAR2Q9Y312 384 aaKnown RBP11.49□□□□□ -0.57
NUP50-216ENST00000486184 PCDHB9Q9Y5E1 797 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 MUC3AQ02505 3323 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 LRRK1Q38SD2 2015 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 TBC1D3DA0A087WVF3 549 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 TBC1D3IA0A087WXS9 549 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 TBC1D3EA0A087X179 549 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 TBC1D3KA0A087X1G2 549 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 TBC1D3FA6NER0 549 aaPredicted RBP11.48□□□□□ -0.57
NUP50-216ENST00000486184 PRR23AA6NEV1 266 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 UPK3BL1B0FP48 263 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 TBC1D3LB9A6J9 549 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 UPK3BL2E5RIL1 263 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 E7EVH7 732 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 FANCGO15287 622 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 PMPCBO75439 489 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 GCATO75600 419 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 RHOBTB1O94844 696 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 PCDH8O95206 1070 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 SEMA4FO95754 770 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 TBC1D3HP0C7X1 549 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 PSMB4P28070 264 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 CD68P34810 354 aaPredicted RBP11.48□□□□□ -0.57
NUP50-216ENST00000486184 COILP38432 576 aaPredicted RBP11.48□□□□□ -0.57
NUP50-216ENST00000486184 KCNJ1P48048 391 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 LMAN1P49257 510 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 FNTAP49354 379 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 GDF10P55107 478 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 FAM193AP78312 1265 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 SKOR1P84550 965 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 TRAF2Q12933 501 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 MPP3Q13368 585 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 SIM2Q14190 667 aaPredicted RBP11.48□□□□□ -0.57
NUP50-216ENST00000486184 ELF2Q15723 593 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 SLC14A2Q15849 920 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 CYP1B1Q16678 543 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 DNTTIP2Q5QJE6 756 aaKnown RBP11.48□□□□□ -0.57
NUP50-216ENST00000486184 PIP5KL1Q5T9C9 394 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 AGBL4Q5VU57 503 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 TBC1D3GQ6DHY5 549 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 TBC1D3CQ6IPX1 549 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 C4orf22Q6V702 233 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 LPCAT2Q7L5N7 544 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 TBC1D3Q8IZP1 549 aaPredicted RBP11.48□□□□□ -0.57
NUP50-216ENST00000486184 FAM160A2Q8N612 972 aaPredicted RBP11.48□□□□□ -0.57
NUP50-216ENST00000486184 ZBTB44Q8NCP5 570 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 LPCAT1Q8NF37 534 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 SPATA22Q8NHS9 363 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 NELL1Q92832 810 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 RMDN1Q96DB5 314 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 RTP4Q96DX8 246 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 GPR174Q9BXC1 333 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 TDRD1Q9BXT4 1180 aaKnown RBP11.48□□□□□ -0.57
NUP50-216ENST00000486184 KDM4CQ9H3R0 1056 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 PCDH9Q9HC56 1237 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 WSB2Q9NYS7 404 aaPredicted RBP11.48□□□□□ -0.57
NUP50-216ENST00000486184 UBP1Q9NZI7 540 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 PAK5Q9P286 719 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 SERGEFQ9UGK8 458 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 PHTF1Q9UMS5 762 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 CHKBQ9Y259 395 aa11.48□□□□□ -0.57
NUP50-216ENST00000486184 NUMA1Q14980 2115 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 TRPM6Q9BX84 2022 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 TNRC6BQ9UPQ9 1833 aaKnown RBP11.47□□□□□ -0.57
NUP50-216ENST00000486184 TSPAN11A1L157 253 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 MEI4A8MW99 385 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 TRAFD1O14545 582 aaPredicted RBP11.47□□□□□ -0.57
NUP50-216ENST00000486184 PSMD3O43242 534 aa11.47□□□□□ -0.57
NUP50-216ENST00000486184 HTRA2O43464 458 aaPredicted RBP11.47□□□□□ -0.57
NUP50-216ENST00000486184 PLRG1O43660 514 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms