RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 RNF34Q969K3 372 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 SERAC1Q96JX3 654 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 RPRD1AQ96P16 312 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 BBC3Q96PG8 261 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 ELF4Q99607 663 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 CDC6Q99741 560 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 FEM1AQ9BSK4 669 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 CNPY3Q9BT09 278 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 ACE2Q9BYF1 805 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 OSBPL8Q9BZF1 889 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 FBRSQ9HAH7 460 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 FZD3Q9NPG1 666 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 PIGVQ9NUD9 493 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 AMACRQ9UHK6 382 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 NBEAQ8NFP9 2946 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 CABIN1Q9Y6J0 2220 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 MYLKQ15746 1914 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 A0A0D9SEW6 157 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 LRRC72A6NJI9 287 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 TLR4O00206 839 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 TTI1O43156 1089 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 OPA1O60313 960 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 RNASEH1O60930 286 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 SASH3O75995 380 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 ENDOD1O94919 500 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 ECEL1O95672 775 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 GAS8O95995 478 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 ITGAVP06756 1048 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 RARAP10276 462 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 GPD1P21695 349 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 C5AR1P21730 350 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 CCR1P32246 355 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 RFC1P35251 1148 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 HSPA9P38646 679 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 PTGIRP43119 386 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 GRK6P43250 576 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 SSR1P43307 286 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 CARSP49589 748 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 PLK1P53350 603 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 NXPH1P58417 271 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 TAS2R40P59535 323 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 SLC6A3Q01959 620 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 KLF1Q13351 362 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 SUZ12Q15022 739 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 SIX1Q15475 284 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 TFDP3Q5H9I0 405 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 CFAP58Q5T655 872 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 AGBL4Q5VU57 503 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 CCDC137Q6PK04 289 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 KDM7AQ6ZMT4 941 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 CEP128Q6ZU80 1094 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 KANSL1Q7Z3B3 1105 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 JAMLQ86YT9 394 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 CCDC50Q8IVM0 306 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 CCDC117Q8IWD4 279 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 KDM1BQ8NB78 822 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 CHST14Q8NCH0 376 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 ATL2Q8NHH9 583 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 PIP4K2CQ8TBX8 421 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 FAM71BQ8TC56 605 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 IFT81Q8WYA0 676 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 ARRDC3Q96B67 414 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 CNDP2Q96KP4 475 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 TBCBQ99426 244 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 TRIM7Q9C029 511 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 TKTL2Q9H0I9 626 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 MPP6Q9NZW5 540 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 PPM1HQ9ULR3 514 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 FZD4Q9ULV1 537 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 HPCAL4Q9UM19 191 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 SCML1Q9UN30 329 aa9.55□□□□□ -0.88
TMEM39A-208ENST00000486159 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 A0A1B0GVM2 712 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 TCAF2A6NFQ2 919 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 C2CD4BA6NLJ0 364 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 ZNF487B1APH4 448 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 GOLGA8SH3BPF8 625 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 LATO43561 262 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 PLRG1O43660 514 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 ATP9BO43861 1147 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 HSF2BPO75031 334 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 ZNF821O75541 412 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 DAB1O75553 588 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 GJB6O95452 261 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 LDOC1O95751 146 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 KRT1P04264 644 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 MYBL2P10244 700 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 SRCP12931 536 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 SULT1E1P49888 294 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 CCR5P51681 352 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 CAV1Q03135 178 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 GABPB1Q06547 395 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 HLTFQ14527 1009 aaKnown RBP eCLIP9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 SMAD1Q15797 465 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 TAZQ16635 292 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 SOWAHCQ53LP3 525 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 BOLA3Q53S33 107 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 EFHC1Q5JVL4 640 aa9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 FAM102AQ5T9C2 384 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-208ENST00000486159 SPOCD1Q6ZMY3 1216 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms