RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 HYOU1Q9Y4L1 999 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 TSPAN11A1L157 253 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 PEX11BO96011 259 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 KRT7P08729 469 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 SERPINA4P29622 427 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 MAN1A1P33908 653 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 IGFALSP35858 605 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 CSNK1DP48730 415 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 SHC2P98077 582 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 BCL2L1Q07817 233 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 OVGP1Q12889 678 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 RFTN1Q14699 578 aaPredicted RBP12.39□□□□□ -0.43
MSH5-216ENST00000484309 GRM3Q14832 879 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 UGP2Q16851 508 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 INAVAQ3KP66 663 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 TPRG1LQ5T0D9 272 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 KYAT3Q6YP21 454 aaKnown RBP12.39□□□□□ -0.43
MSH5-216ENST00000484309 ABI3BPQ7Z7G0 1075 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 OXR1Q8N573 874 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.39□□□□□ -0.43
MSH5-216ENST00000484309 RFFLQ8WZ73 363 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 RAPGEF5Q92565 580 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 ZNF599Q96NL3 588 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 PSKH2Q96QS6 385 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 TUBGCP5Q96RT8 1024 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 ERVMER34-1Q9H9K5 563 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 TOR4AQ9NXH8 423 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 RCOR3Q9P2K3 495 aaPredicted RBP12.39□□□□□ -0.43
MSH5-216ENST00000484309 FTSJ1Q9UET6 329 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 HS3ST3A1Q9Y663 406 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 IGF2RP11717 2491 aa12.39□□□□□ -0.43
MSH5-216ENST00000484309 LRRD1A4D1F6 860 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 A8MX80 341 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 FPGTO14772 594 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 YKT6O15498 198 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 FFAR2O15552 330 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 TM7SF2O76062 418 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 KRT1P04264 644 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 KDELR1P24390 212 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 MAGEA1P43355 309 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 MMP13P45452 471 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 RXRGP48443 463 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 RENBPP51606 427 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 GBE1Q04446 702 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 ELP6Q0PNE2 266 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 DNAJC3Q13217 504 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 PDE1CQ14123 709 aaPredicted RBP12.38□□□□□ -0.43
MSH5-216ENST00000484309 PDK2Q15119 407 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 TMEM52BQ4KMG9 183 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 FAM182AQ5T1J6 154 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 BRAT1Q6PJG6 821 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 KANSL1Q7Z3B3 1105 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 GLRX5Q86SX6 157 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 RHOT2Q8IXI1 618 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 PQLC3Q8N755 202 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 PDCD6IPQ8WUM4 868 aaKnown RBP12.38□□□□□ -0.43
MSH5-216ENST00000484309 NSMCE1Q8WV22 266 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 CNDP2Q96KP4 475 aaKnown RBP12.38□□□□□ -0.43
MSH5-216ENST00000484309 ZNF641Q96N77 438 aaPredicted RBP12.38□□□□□ -0.43
MSH5-216ENST00000484309 CDC6Q99741 560 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 ZNF670Q9BS34 389 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 GOLPH3Q9H4A6 298 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 NT5MQ9NPB1 228 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 MBNL1Q9NR56 388 aaKnown RBP12.38□□□□□ -0.43
MSH5-216ENST00000484309 UCKL1Q9NWZ5 548 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 DNAJC28Q9NX36 388 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 APOBEC2Q9Y235 224 aaKnown RBP12.38□□□□□ -0.43
MSH5-216ENST00000484309 ATP8A1Q9Y2Q0 1164 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 PCDHGC4Q9Y5F7 938 aa12.38□□□□□ -0.43
MSH5-216ENST00000484309 C1QTNF9BB2RNN3 333 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 RIOK3O14730 519 aaKnown RBP12.37□□□□□ -0.43
MSH5-216ENST00000484309 TNFSF14O43557 240 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 MTA2O94776 668 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 C1QTNF9P0C862 333 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 C6P13671 934 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 MMP12P39900 470 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 GARSP41250 739 aaKnown RBP12.37□□□□□ -0.43
MSH5-216ENST00000484309 NOP2P46087 812 aaKnown RBP12.37□□□□□ -0.43
MSH5-216ENST00000484309 LIG3P49916 1009 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 AP1S1P61966 158 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 ITKQ08881 620 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 NSUN2Q08J23 767 aaKnown RBP eCLIP12.37□□□□□ -0.43
MSH5-216ENST00000484309 GALNT2Q10471 571 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 TRAF2Q12933 501 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 FZD2Q14332 565 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 PAFAH1B3Q15102 231 aaKnown RBP12.37□□□□□ -0.43
MSH5-216ENST00000484309 IRF4Q15306 451 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 MARC1Q5VT66 337 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 ERAP2Q6P179 960 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 RAB44Q7Z6P3 723 aaPredicted RBP12.37□□□□□ -0.43
MSH5-216ENST00000484309 MARCH9Q86YJ5 346 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 MAP7D3Q8IWC1 876 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 BBS5Q8N3I7 341 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 TP53I13Q8NBR0 393 aaPredicted RBP12.37□□□□□ -0.43
MSH5-216ENST00000484309 DENND6BQ8NEG7 585 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 ADAMTS14Q8WXS8 1223 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 RNF25Q96BH1 459 aaPredicted RBP12.37□□□□□ -0.43
MSH5-216ENST00000484309 CENPTQ96BT3 561 aa12.37□□□□□ -0.43
MSH5-216ENST00000484309 FAF2Q96CS3 445 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms