RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 PRG2P13727 222 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ADSLP30566 484 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SLC7A2P52569 658 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 IL2P60568 153 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RAB10P61026 200 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RPL38P63173 70 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ARF5P84085 180 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TYSND1Q2T9J0 566 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CTXN3Q4LDR2 81 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 NEPROQ6NW34 567 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CLNKQ7Z7G1 428 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CCDC185Q8N715 623 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SPATA20Q8TB22 786 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 STAG3L4Q8TBR4 150 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 MCOLN3Q8TDD5 553 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SELENOMQ8WWX9 145 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SYT15Q9BQS2 421 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CCDC28BQ9BUN5 200 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 FAM126AQ9BYI3 521 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TKTL2Q9H0I9 626 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SNX15Q9NRS6 342 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 MCUBQ9NWR8 336 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 REXO2Q9Y3B8 237 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SAMHD1Q9Y3Z3 626 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 XRN1Q8IZH2 1706 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TTLL13PA6NNM8 815 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 FFAR3O14843 346 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 GPR42O15529 346 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 DYRK3O43781 588 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SHOX2O60902 331 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 THPOP40225 353 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RARRES1P49788 294 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PPP3CAQ08209 521 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 LIN54Q6MZP7 749 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 FAM20CQ8IXL6 584 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 POMGNT2Q8NAT1 580 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ACMSDQ8TDX5 336 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 P2RX7Q99572 595 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 COLEC11Q9BWP8 271 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 BCL2L14Q9BZR8 327 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CCNB1IP1Q9NPC3 277 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ARL15Q9NXU5 204 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 H3BMM5 538 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SMIM22K7EJ46 135 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CHRNGP07510 517 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 NFKB1P19838 968 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 MYL9P24844 172 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PIK3CGP48736 1102 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CDK9P50750 372 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 HIRAP54198 1017 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RHAGQ02094 409 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RNASE12Q5GAN4 147 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 NEK5Q6P3R8 708 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 OTOP1Q7RTM1 612 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RBM15BQ8NDT2 890 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CIB1Q99828 191 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PHF11Q9UIL8 331 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RGPD8O14715 1765 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 IQCMA0A1B0GVH7 501 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 LACTBL1A8MY62 500 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TM7SF2O76062 418 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 OR6A2O95222 327 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 THP07101 528 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RTP1P59025 263 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 HSF2Q03933 536 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ACSM2AQ08AH3 577 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 VGLL4Q14135 290 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 INTS11Q5TA45 600 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ACSM2BQ68CK6 577 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RDH11Q8TC12 318 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 GLT1D1Q96MS3 346 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 MRPL57Q9BQC6 102 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 NMUR2Q9GZQ4 415 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ZNF224Q9NZL3 707 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TNPO3Q9Y5L0 923 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 FADS3Q9Y5Q0 445 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TCRBV9S1A1TA0A576 114 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SIGLEC16A6NMB1 481 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 DNM1LO00429 736 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SERPINA1P01009 418 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PTPRAP18433 802 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TFEBP19484 476 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PTPN5P54829 565 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RFX4Q33E94 735 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 LRP10Q7Z4F1 713 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 GALNT5Q7Z7M9 940 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SPPL2CQ8IUH8 684 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SLC2A14Q8TDB8 520 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ZBTB45Q96K62 511 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 VAT1Q99536 393 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ACE2Q9BYF1 805 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ERVK-5Q9HDB9 667 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TLR8Q9NR97 1041 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 A8MX80 341 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 DCDC2CA8MYV0 355 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 C9P02748 559 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 FGRP09769 529 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 DNAJB2P25686 324 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 FAM183BPQ6ZVS7 135 aa9.61□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PEG10Q86TG7 708 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms