RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 TTC24A2A3L6 582 aaPredicted RBP18.55■□□□□ 0.56
SMIM4-204ENST00000482728 UPK3BL1B0FP48 263 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 UPK3BL2E5RIL1 263 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 KCNK3O14649 394 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 DFNA5O60443 496 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 WNT1P04628 370 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 CCNB1P14635 433 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 HNRNPA2B1P22626 353 aaKnown RBP18.55■□□□□ 0.56
SMIM4-204ENST00000482728 CDKN2BP42772 138 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 CTSKP43235 329 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 MAXP61244 160 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 PDK1Q15118 436 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 RALGPS1Q5JS13 557 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 SPOCD1Q6ZMY3 1216 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 BZW1Q7L1Q6 419 aaKnown RBP18.55■□□□□ 0.56
SMIM4-204ENST00000482728 ERMP1Q7Z2K6 904 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 IQCHQ86VS3 1027 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 CCDC13Q8IYE1 715 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 PGBD5Q8N414 524 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 TEX26Q8N6G2 289 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 CXorf40AQ8TE69 158 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 FATE1Q969F0 183 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 KLHDC7BQ96G42 594 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 RBM41Q96IZ5 413 aaKnown RBP18.55■□□□□ 0.56
SMIM4-204ENST00000482728 MGME1Q9BQP7 344 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 C1QTNF2Q9BXJ5 285 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 NOD2Q9HC29 1040 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 GDF3Q9NR23 364 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 GGT7Q9UJ14 662 aa18.55■□□□□ 0.56
SMIM4-204ENST00000482728 PLXNA2O75051 1894 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 A0A1W2PQ67 120 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 TSPAN11A1L157 253 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 MACROD2A1Z1Q3 448 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 MMP20O60882 483 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 GJB3O75712 270 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 ITIH2P19823 946 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 CES1P23141 567 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 FAM193AP78312 1265 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 SUZ12Q15022 739 aaKnown RBP18.54■□□□□ 0.56
SMIM4-204ENST00000482728 LLGL1Q15334 1064 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 TFDP3Q5H9I0 405 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 KAZNQ674X7 775 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 CCDC112Q8NEF3 446 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 EXD1Q8NHP7 514 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 PDCD6IPQ8WUM4 868 aaKnown RBP18.54■□□□□ 0.56
SMIM4-204ENST00000482728 MAML1Q92585 1016 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 HDAC11Q96DB2 347 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 LGMNQ99538 433 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 SEMA3CQ99985 751 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 WRAP53Q9BUR4 548 aaKnown RBP18.54■□□□□ 0.56
SMIM4-204ENST00000482728 POLR1EQ9GZS1 481 aaKnown RBP18.54■□□□□ 0.56
SMIM4-204ENST00000482728 SLC32A1Q9H598 525 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 IL21RQ9HBE5 538 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 FZD3Q9NPG1 666 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 PCDH12Q9NPG4 1184 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 TM7SF3Q9NS93 570 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 AMACRQ9UHK6 382 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 CA5BQ9Y2D0 317 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 TTLL3Q9Y4R7 772 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 PCDHGC4Q9Y5F7 938 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 HS3ST3A1Q9Y663 406 aa18.54■□□□□ 0.56
SMIM4-204ENST00000482728 GOLGA6L3A6NEY3 463 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 PPP1R12AO14974 1030 aaPredicted RBP18.53■□□□□ 0.56
SMIM4-204ENST00000482728 NRDCO43847 1150 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 CST8O60676 142 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 SOCS5O75159 536 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 TM7SF2O76062 418 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 JCHAINP01591 159 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 ZNF883P0CG24 379 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 KRT10P13645 584 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 CR2P20023 1033 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 CETN2P41208 172 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 MARCKSL1P49006 195 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 NR2C2P49116 596 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 AP1B1Q10567 949 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 TAZQ16635 292 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 TMEM52BQ4KMG9 183 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 PPM1JQ5JR12 505 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 SYCE1Q8N0S2 351 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.53■□□□□ 0.56
SMIM4-204ENST00000482728 TMEM145Q8NBT3 493 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 FAM174AQ8TBP5 190 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 LRRN4Q8WUT4 740 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 ASB12Q8WXK4 309 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 KRT35Q92764 455 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 ECHDC3Q96DC8 303 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 C1QTNF7Q9BXJ2 289 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 BRD8Q9H0E9 1235 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 GRPEL1Q9HAV7 217 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 FNDC3AQ9Y2H6 1198 aaKnown RBP18.53■□□□□ 0.56
SMIM4-204ENST00000482728 ATP8A1Q9Y2Q0 1164 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 PCDHA3Q9Y5H8 950 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 CACNA1AO00555 2505 aa18.53■□□□□ 0.56
SMIM4-204ENST00000482728 CCDC66A2RUB6 948 aa18.52■□□□□ 0.56
SMIM4-204ENST00000482728 H0Y8X5 98 aa18.52■□□□□ 0.56
SMIM4-204ENST00000482728 TRAFD1O14545 582 aaPredicted RBP18.52■□□□□ 0.56
SMIM4-204ENST00000482728 RIOK3O14730 519 aaKnown RBP18.52■□□□□ 0.56
SMIM4-204ENST00000482728 ARHGAP6O43182 974 aa18.52■□□□□ 0.56
SMIM4-204ENST00000482728 SPINT1O43278 529 aa18.52■□□□□ 0.56
SMIM4-204ENST00000482728 KCNK5O95279 499 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms