RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CPT1BQ92523 772 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 HSPH1Q92598 858 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 KAT2BQ92831 832 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 C18orf25Q96B23 403 aaPredicted RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 RCC1LQ96I51 464 aaKnown RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 ZNF668Q96K58 619 aaPredicted RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 HNRNPABQ99729 332 aaKnown RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 PRMT1Q99873 361 aaKnown RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 BRD8Q9H0E9 1235 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 FAM49AQ9H0Q0 323 aaPredicted RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 VPS37BQ9H9H4 285 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 PNPLA8Q9NP80 782 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 HMGXB4Q9UGU5 601 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 PCSK1NQ9UHG2 260 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 FBXL21Q9UKT6 434 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 STAP1Q9ULZ2 295 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 PADI4Q9UM07 663 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 PIN4Q9Y237 131 aaKnown RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 USP15Q9Y4E8 981 aaPredicted RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 IKBKGQ9Y6K9 419 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 CFAP73A6NFT4 308 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 CCT8L1PA6NM43 557 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 H7C0C1 242 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 SHOXO15266 292 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 DUSP11O75319 330 aaKnown RBP7.88□□□□□ -1.15
SNX13-208ENST00000482558 GCATO75600 419 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 ATP5HO75947 161 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 PFKMP08237 780 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 KRT15P19012 456 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 ALDH3A1P30838 453 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 RPL9P32969 192 aaKnown RBP7.88□□□□□ -1.15
SNX13-208ENST00000482558 FDFT1P37268 417 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 GDNFP39905 211 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 ARL4AP40617 200 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 PIK3CBP42338 1070 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 MSH2P43246 934 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 GPR3P46089 330 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 ATP5OP48047 213 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 NKX3-2P78367 333 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 PLIN5Q00G26 463 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 SOWAHAQ2M3V2 549 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 SMTNL2Q2TAL5 461 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 KCNT1Q5JUK3 1230 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 SPDYAQ5MJ70 313 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 DAB2IPQ5VWQ8 1189 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 TXNRD3NBQ6F5E7 133 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 CYP4F22Q6NT55 531 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 PMF1Q6P1K2 205 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 VSTM1Q6UX27 236 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 C22orf34Q6ZV56 151 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 USP53Q70EK8 1073 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 ACOT1Q86TX2 421 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 TTC30AQ86WT1 665 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 ZC3H7AQ8IWR0 971 aaKnown RBP7.88□□□□□ -1.15
SNX13-208ENST00000482558 EMC1Q8N766 993 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 PLD5Q8N7P1 536 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 DTWD2Q8NBA8 298 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 MDM1Q8TC05 714 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 JADE3Q92613 823 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 C9orf72Q96LT7 481 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 MRPL45Q9BRJ2 306 aaKnown RBP7.88□□□□□ -1.15
SNX13-208ENST00000482558 CHCHD6Q9BRQ6 235 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 MTG1Q9BT17 334 aaPredicted RBP7.88□□□□□ -1.15
SNX13-208ENST00000482558 C11orf84Q9BUA3 381 aaPredicted RBP7.88□□□□□ -1.15
SNX13-208ENST00000482558 DUSP16Q9BY84 665 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 B3GNT5Q9BYG0 378 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 TRABDQ9H4I3 376 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 BRD9Q9H8M2 597 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 PCDH18Q9HCL0 1135 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 XAB2Q9HCS7 855 aaKnown RBP7.88□□□□□ -1.15
SNX13-208ENST00000482558 HAUS2Q9NVX0 235 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.88□□□□□ -1.15
SNX13-208ENST00000482558 KLHL14Q9P2G3 628 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 XPO7Q9UIA9 1087 aaKnown RBP7.88□□□□□ -1.15
SNX13-208ENST00000482558 MAGED2Q9UNF1 606 aaPredicted RBP7.88□□□□□ -1.15
SNX13-208ENST00000482558 ARL2BPQ9Y2Y0 163 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 SNX5Q9Y5X3 404 aa7.88□□□□□ -1.15
SNX13-208ENST00000482558 RHPN2P1A8MT19 583 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 AP3B1O00203 1094 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 PAPSS1O43252 624 aaPredicted RBP7.87□□□□□ -1.15
SNX13-208ENST00000482558 MTSS1O43312 755 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 B3GALT2O43825 422 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 SNX3O60493 162 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 CSDE1O75534 798 aaKnown RBP7.87□□□□□ -1.15
SNX13-208ENST00000482558 DAB1O75553 588 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 INMTO95050 263 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 F9P00740 461 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 MLNP12872 115 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 TPSB2P20231 275 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 CD247P20963 164 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 XPAP23025 273 aaPredicted RBP7.87□□□□□ -1.15
SNX13-208ENST00000482558 GRK2P25098 689 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 CNTFP26441 200 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 HOXC12P31275 282 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 SKIV2L2P42285 1042 aaKnown RBP7.87□□□□□ -1.15
SNX13-208ENST00000482558 MATKP42679 507 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 MAPK10P53779 464 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 DYNLT1P63172 113 aa7.87□□□□□ -1.15
SNX13-208ENST00000482558 CACNB2Q08289 660 aaPredicted RBP7.87□□□□□ -1.15
SNX13-208ENST00000482558 CCDC15Q0P6D6 951 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms