RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 ERAP2Q6P179 960 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 PSTKQ8IV42 348 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 FNIP1Q8TF40 1166 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 FGF11Q92914 225 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 GLMNQ92990 594 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 TRIM11Q96F44 468 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 DEPDC7Q96QD5 511 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 TUBGCP5Q96RT8 1024 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 WRAP53Q9BUR4 548 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 SLC13A1Q9BZW2 595 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 PDFQ9HBH1 243 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 MRPL47Q9HD33 250 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 LHX3Q9UBR4 397 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 CNOT8Q9UFF9 292 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 KLF15Q9UIH9 416 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 PNMA8BQ9ULN7 279 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 SCINQ9Y6U3 715 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 ANKRD36A6QL64 1941 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 GOLGA4Q13439 2230 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 PIGNO95427 931 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 SERPINC1P01008 464 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 ANXA6P08133 673 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 MYBL1P10243 752 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 MYF5P13349 255 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 TCF4P15884 667 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 ERCC2P18074 760 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 IGFALSP35858 605 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 PRKCIP41743 596 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 CSNK1DP48730 415 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 HCAR3P49019 387 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 RPIAP49247 311 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 PEX5P50542 639 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 ADKP55263 362 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 PPARDQ03181 441 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 NSUN2Q08J23 767 aaKnown RBP eCLIP13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 LRRC14Q15048 493 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 DEFB133Q30KQ1 61 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 PRRT3Q5FWE3 981 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 PPP6R3Q5H9R7 873 aaPredicted RBP13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 CDCP2Q5VXM1 449 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 BRAT1Q6PJG6 821 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 RFX8Q6ZV50 586 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 NYAP1Q6ZVC0 841 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 SRLQ86TD4 932 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 TP53INP2Q8IXH6 220 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 LSMEM2Q8N112 164 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 PAF1Q8N7H5 531 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 TP53I13Q8NBR0 393 aaPredicted RBP13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 TPCN2Q8NHX9 752 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 IFI44Q8TCB0 444 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 MAPK15Q8TD08 544 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 TBATAQ96M53 351 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 NSMCE3Q96MG7 304 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 SNRNP25Q9BV90 132 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 ZWILCHQ9H900 591 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 SP110Q9HB58 689 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 MBNL1Q9NR56 388 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 APOBEC3BQ9UH17 382 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 NBEAQ8NFP9 2946 aa13.57□□□□□ -0.24
CTDSP1-208ENST00000482272 LRP4O75096 1905 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 DSPP15924 2871 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 LY6G6EA0A0G2JKS1 128 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 TSPAN11A1L157 253 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 CPED1A4D0V7 1026 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 EME2A4GXA9 379 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 DFFAO00273 331 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 TLX3O43711 291 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 LZTS3O60299 673 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 BRINP1O60477 761 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 SKILP12757 684 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 HTR1BP28222 390 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 SERPINA4P29622 427 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 MIPP30301 263 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 RGRP47804 291 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 POLR2LP62875 67 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 TPM4P67936 248 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 C1orf61Q13536 156 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 RFTN1Q14699 578 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 NR1I3Q14994 352 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 ACAP1Q15027 740 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 NR0B2Q15466 257 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 CDKN3Q16667 212 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 MACC1Q6ZN28 852 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 ARHGAP36Q6ZRI8 547 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 CAMK1DQ8IU85 385 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 ARHGAP12Q8IWW6 846 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 PHACTR4Q8IZ21 702 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 RBFAQ8N0V3 343 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 LZTR1Q8N653 840 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 NPWQ8N729 165 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 ATL2Q8NHH9 583 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 SCG3Q8WXD2 468 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 ZNF653Q96CK0 615 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 KCTD15Q96SI1 283 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 CINPQ9BW66 212 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 ATP13A3Q9H7F0 1226 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 MYO1AQ9UBC5 1043 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 DOLKQ9UPQ8 538 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 U3KQA8 63 aa13.56□□□□□ -0.24
CTDSP1-208ENST00000482272 CFAP69A5D8W1 941 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms