RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 SYT17Q9BSW7 474 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 FUZQ9BT04 418 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 TUBB2BQ9BVA1 445 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 NFKBIZQ9BYH8 718 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 TMPRSS5Q9H3S3 457 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 GPR108Q9NPR9 543 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 AKIP1Q9NQ31 210 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 SLC35C2Q9NQQ7 365 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 POLE3Q9NRF9 147 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 TMEM74BQ9NUR3 256 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 CYP39A1Q9NYL5 469 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 CNIH4Q9P003 139 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 COX16Q9P0S2 106 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 SPATA7Q9P0W8 599 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 KCND3Q9UK17 655 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 PSME2Q9UL46 239 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 RAD54BQ9Y620 910 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 AATKQ6ZMQ8 1374 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 FAM205AQ6ZU69 1335 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 PHLPP2Q6ZVD8 1323 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 KDM3AQ9Y4C1 1321 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 SYCE3A1L190 88 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 TMEM232C9JQI7 657 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 E7EVH7 732 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 H0YIV9 168 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 EBAG9O00559 213 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 SOCS6O14544 535 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 PCDH17O14917 1159 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 SMAD6O43541 496 aaKnown RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 CYTIPO60759 359 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 FZD7O75084 574 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 SPAG6O75602 509 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 FLOT1O75955 427 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 SUN1O94901 812 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 LETM1O95202 739 aaPredicted RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 YEATS4O95619 227 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 ONECUT2O95948 504 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 PDGFBP01127 241 aaPredicted RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 S100A9P06702 114 aaKnown RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 S100A6P06703 90 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 MMP2P08253 660 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 CYP21A2P08686 494 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 RHOXF2BP0C7M4 288 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 MYBL1P10243 752 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 TXNP10599 105 aaKnown RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 CPA1P15085 419 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 NPPBP16860 134 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 SFPQP23246 707 aaKnown RBP eCLIP4.24□□□□□ -1.73
VPS41-212ENST00000482217 KLRK1P26718 216 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 S100A5P33763 92 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 PGM1P36871 562 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 CASP3P42574 277 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 PAFAH1B1P43034 410 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 CCR10P46092 362 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 TOB1P50616 345 aaPredicted RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 CLCNKAP51800 687 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 CCNHP51946 323 aaPredicted RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 PMS2P54278 862 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 BCAT1P54687 386 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 NME5P56597 212 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 HUNKP57058 714 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 CARD18P57730 90 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 LOXL3P58215 753 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 YWHAZP63104 245 aaKnown RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 TUBB4BP68371 445 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 CXADRP78310 365 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 GPS1Q13098 491 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 HLXQ14774 488 aaPredicted RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 PCLAFQ15004 111 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 DPYSL2Q16555 572 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 ZSCAN26Q16670 478 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 BTBD16Q32M84 506 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 BEAN1Q3B7T3 259 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 FBXO48Q5FWF7 155 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 PLEKHS1Q5SXH7 462 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 B3GNTL1Q67FW5 361 aaPredicted RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 RAP1GAP2Q684P5 730 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 CAPRIN2Q6IMN6 1127 aaKnown RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 PPP1R21Q6ZMI0 780 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 RNF207Q6ZRF8 634 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 LINC00696Q6ZRV3 163 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 C1orf186Q6ZWK4 172 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 RNF44Q7L0R7 432 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 HOOK3Q86VS8 718 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 GATAD2AQ86YP4 633 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 MPP5Q8N3R9 675 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 ARL14Q8N4G2 192 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 ZNF276Q8N554 614 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 VGLL2Q8N8G2 317 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 POMGNT2Q8NAT1 580 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 PSD4Q8NDX1 1056 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 OR56A3Q8NH54 315 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 SLC13A3Q8WWT9 602 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 WASF1Q92558 559 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 CORO2AQ92828 525 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 EXTL1Q92935 676 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 SPSB4Q96A44 273 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 FUBP1Q96AE4 644 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms