RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 CST6Q15828 149 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 ZNF805Q5CZA5 627 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 ARMC12Q5T9G4 340 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 FAM46CQ5VWP2 391 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 RANBP10Q6VN20 620 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 BMP8AQ7Z5Y6 402 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 CAMK1DQ8IU85 385 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 FLCNQ8NFG4 579 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 IPMKQ8NFU5 416 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 TBL1YQ9BQ87 522 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 PHACTR1Q9C0D0 580 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 MKRN2Q9H000 416 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 POLMQ9NP87 494 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 GDF3Q9NR23 364 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 UBP1Q9NZI7 540 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 SARDHQ9UL12 918 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 SNX24Q9Y343 169 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 PPIL1Q9Y3C6 166 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 PCDHGC4Q9Y5F7 938 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 KMT2EQ8IZD2 1858 aa12.65□□□□□ -0.38
TRAPPC12-218ENST00000479897 ZDBF2Q9HCK1 2354 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 AP3B1O00203 1094 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 CPP00450 1065 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 C5AR1P21730 350 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 TNFRSF8P28908 595 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 MAGEA3P43357 314 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 SUOXP51687 545 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 ITGA8P53708 1063 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 RPS14P62263 151 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 SARNPP82979 210 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 GUCY2DQ02846 1103 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 CDH17Q12864 832 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 CUL1Q13616 776 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 SLC1A5Q15758 541 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 KCTD19Q17RG1 926 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 ARSIQ5FYB1 569 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 ANKRD22Q5VYY1 191 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 ARMC3Q5W041 872 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 DENND5AQ6IQ26 1287 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 PPP1R21Q6ZMI0 780 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 ZNF534Q76KX8 674 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 RASSF3Q86WH2 238 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 MMAAQ8IVH4 418 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 TAB3Q8N5C8 712 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 EIF1ADQ8N9N8 165 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 PIH1D2Q8WWB5 315 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 ART4Q93070 314 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 IFT43Q96FT9 208 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 MRGPRX1Q96LB2 322 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 KLHL32Q96NJ5 620 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 MCCC1Q96RQ3 725 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 LYSMD1Q96S90 227 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 FICDQ9BVA6 458 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 ADGRE3Q9BY15 652 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 HDAC8Q9BY41 377 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 TRIM31Q9BZY9 425 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 DPH5Q9H2P9 285 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 ANKZF1Q9H8Y5 726 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 XAB2Q9HCS7 855 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 CASS4Q9NQ75 786 aa12.64□□□□□ -0.39
TRAPPC12-218ENST00000479897 ZNF106Q9H2Y7 1883 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 TCRBV7S3A2A0A539 114 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 TCRBV21S2A2A0A5A6 115 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 C16orf96A6NNT2 1141 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 UPK3BL1B0FP48 263 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 UPK3BL2E5RIL1 263 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 KPNA3O00505 521 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 STK25O00506 426 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 PPFIA2O75334 1257 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 IL1BP01584 269 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 PDHA1P08559 390 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 RHOXF2BP0C7M4 288 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 GABRG2P18507 467 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 NDUFV2P19404 249 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 NFKBIAP25963 317 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 DRD3P35462 400 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 TNNT3P45378 269 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 PSMD8P48556 350 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 LMAN1P49257 510 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 CCR3P51677 355 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 POLR2LP62875 67 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 SFSWAPQ12872 951 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 MTAPQ13126 283 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 PCSK7Q16549 785 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 TTC31Q49AM3 519 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 LRRC8BQ6P9F7 803 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 ZDHHC24Q6UX98 284 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 USP30Q70CQ3 517 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 PARS2Q7L3T8 475 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 ZSWIM9Q86XI8 627 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 TMPRSS6Q8IU80 811 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 IFT20Q8IY31 132 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 CAMKK1Q8N5S9 505 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 UBXN4Q92575 508 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 RAB7BQ96AH8 199 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 ARRDC3Q96B67 414 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 SRPK1Q96SB4 655 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 RHOXF2Q9BQY4 288 aa12.63□□□□□ -0.39
TRAPPC12-218ENST00000479897 FOXP3Q9BZS1 431 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms