RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 CUL4BQ13620 913 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 AUHQ13825 339 aaKnown RBP11.3□□□□□ -0.6
CCDC18-208ENST00000479653 EDRF1Q3B7T1 1238 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 KRTAP21-3Q3LHN1 58 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 C14orf28Q4W4Y0 310 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 CARD16Q5EG05 197 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 ANKS6Q68DC2 871 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 OGFOD3Q6PK18 319 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 KRBA2Q6ZNG9 492 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 NYAP1Q6ZVC0 841 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 FAM186BQ8IYM0 893 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 RYBPQ8N488 228 aaPredicted RBP11.3□□□□□ -0.6
CCDC18-208ENST00000479653 TFAP2BQ92481 460 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 RAB7BQ96AH8 199 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 HSFY1Q96LI6 401 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 PSMB7Q99436 277 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 KLQ9UEF7 1012 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 MAP4K5Q9Y4K4 846 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 PCDHB3Q9Y5E6 796 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 CELSR1Q9NYQ6 3014 aa11.3□□□□□ -0.6
CCDC18-208ENST00000479653 PDZD2O15018 2839 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 SDK2Q58EX2 2172 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 TMEM110-MUSTN1A8MSY1 372 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 RHPN2P1A8MT19 583 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 NUDT21O43809 227 aaKnown RBP11.29□□□□□ -0.6
CCDC18-208ENST00000479653 TM7SF2O76062 418 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 ADCY5O95622 1261 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 SLC2A3P11169 496 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 PRF1P14222 555 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 NR2F2P24468 414 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 GKP32189 559 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 MXI1P50539 228 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 PEX5P50542 639 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 CCNHP51946 323 aaPredicted RBP11.29□□□□□ -0.6
CCDC18-208ENST00000479653 PITX1P78337 314 aaPredicted RBP11.29□□□□□ -0.6
CCDC18-208ENST00000479653 BIRC2Q13490 618 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 CUL2Q13617 745 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 HLTFQ14527 1009 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC18-208ENST00000479653 GSE1Q14687 1217 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 KIAA0895Q8NCT3 520 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 CXorf40AQ8TE69 158 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 MARVELD3Q96A59 401 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 TCTN2Q96GX1 697 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 SPON2Q9BUD6 331 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 SIK2Q9H0K1 926 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 FAM204AQ9H8W3 233 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 OCIAD1Q9NX40 245 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 TMEM63CQ9P1W3 806 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 HECAQ9UBI9 543 aaPredicted RBP11.29□□□□□ -0.6
CCDC18-208ENST00000479653 ERRFI1Q9UJM3 462 aaPredicted RBP11.29□□□□□ -0.6
CCDC18-208ENST00000479653 TLK1Q9UKI8 766 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 TBC1D30Q9Y2I9 924 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 MRPS18BQ9Y676 258 aaKnown RBP11.29□□□□□ -0.6
CCDC18-208ENST00000479653 TRPM6Q9BX84 2022 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 UNC13CQ8NB66 2214 aa11.29□□□□□ -0.6
CCDC18-208ENST00000479653 NYNRINQ9P2P1 1898 aaKnown RBP11.29□□□□□ -0.6
CCDC18-208ENST00000479653 SCN8AQ9UQD0 1980 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 A0A0D9SEW6 157 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 ARHGAP10A1A4S6 786 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 MAPK13O15264 365 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 ZW10O43264 779 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 SART1O43290 800 aaKnown RBP11.28□□□□□ -0.6
CCDC18-208ENST00000479653 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
CCDC18-208ENST00000479653 SMC2O95347 1197 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 LDLRP01130 860 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 PDGFAP04085 211 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 CCR1P32246 355 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 GTF2H1P32780 548 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 PSMC2P35998 433 aaKnown RBP11.28□□□□□ -0.6
CCDC18-208ENST00000479653 NOP2P46087 812 aaKnown RBP11.28□□□□□ -0.6
CCDC18-208ENST00000479653 CDH4P55283 916 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 YWHAEP62258 255 aaKnown RBP11.28□□□□□ -0.6
CCDC18-208ENST00000479653 ERV3-1Q14264 604 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 IRF4Q15306 451 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 CNGA2Q16280 664 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 LRRC73Q5JTD7 316 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 TIPARPQ7Z3E1 657 aaKnown RBP11.28□□□□□ -0.6
CCDC18-208ENST00000479653 TTC7BQ86TV6 843 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 TP53INP2Q8IXH6 220 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 SLC34A3Q8N130 599 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 TP53I13Q8NBR0 393 aaPredicted RBP11.28□□□□□ -0.6
CCDC18-208ENST00000479653 OR6K2Q8NGY2 324 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 ARHGEF26Q96DR7 871 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 RBM15Q96T37 977 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCDC18-208ENST00000479653 CTRCQ99895 268 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 TRIM62Q9BVG3 475 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 GTPBP4Q9BZE4 634 aaKnown RBP11.28□□□□□ -0.6
CCDC18-208ENST00000479653 POPDC2Q9HBU9 364 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 CYP4F12Q9HCS2 524 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 EXOC1Q9NV70 894 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 OR1A2Q9Y585 309 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 APCP25054 2843 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 MTORP42345 2549 aa11.28□□□□□ -0.6
CCDC18-208ENST00000479653 HNRNPRO43390 633 aaKnown RBP11.27□□□□□ -0.61
CCDC18-208ENST00000479653 ZNF821O75541 412 aaPredicted RBP11.27□□□□□ -0.61
CCDC18-208ENST00000479653 RFPL1O75677 317 aa11.27□□□□□ -0.61
CCDC18-208ENST00000479653 CALCAP01258 141 aa11.27□□□□□ -0.61
CCDC18-208ENST00000479653 CD1CP29017 333 aa11.27□□□□□ -0.61
CCDC18-208ENST00000479653 PPM1FP49593 454 aaPredicted RBP11.27□□□□□ -0.61
CCDC18-208ENST00000479653 LIMK2P53671 638 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms