RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 PPP2CBP62714 309 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 PPP2CAP67775 309 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 CCZ1BP86790 482 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 CCZ1P86791 482 aaPredicted RBP15.62■□□□□ 0.09
C9orf3-217ENST00000479161 XRCC4Q13426 336 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 SLC14A2Q15849 920 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 TMEM52BQ4KMG9 183 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 SLC45A4Q5BKX6 768 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 STPG1Q5TH74 334 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 TCEAL6Q6IPX3 200 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 PEX26Q7Z412 305 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 RFX6Q8HWS3 928 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 PGBD5Q8N414 524 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 TMEM145Q8NBT3 493 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 NETO2Q8NC67 525 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 DENND6BQ8NEG7 585 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 KRT35Q92764 455 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 TCEAL3Q969E4 200 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 EXOC2Q96KP1 924 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 EDEM2Q9BV94 578 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 MIR1-1HGQ9H1L0 117 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 SMOC1Q9H4F8 434 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 ERVMER34-1Q9H9K5 563 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 CDV3Q9UKY7 258 aaKnown RBP15.62■□□□□ 0.09
C9orf3-217ENST00000479161 ZFR2Q9UPR6 939 aaKnown RBP15.62■□□□□ 0.09
C9orf3-217ENST00000479161 ATP8A1Q9Y2Q0 1164 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 PPIL1Q9Y3C6 166 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 HS3ST3A1Q9Y663 406 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 ATXN2Q99700 1313 aaKnown RBP15.62■□□□□ 0.09
C9orf3-217ENST00000479161 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.61■□□□□ 0.09
C9orf3-217ENST00000479161 A0A1W2PR77 199 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 HACD1B0YJ81 288 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 APOC4-APOC2K7ER74 178 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 TOR1BO14657 336 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 SPINT1O43278 529 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 GJB3O75712 270 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 PCDH8O95206 1070 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 APOC2P02655 101 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 HNRNPA2B1P22626 353 aaKnown RBP15.61■□□□□ 0.09
C9orf3-217ENST00000479161 CD38P28907 300 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 ABL2P42684 1182 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 CAMK1DQ8IU85 385 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 UBL4BQ8N7F7 174 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 SNX19Q92543 992 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 ANP32BQ92688 251 aaKnown RBP15.61■□□□□ 0.09
C9orf3-217ENST00000479161 P3H4Q92791 437 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 HES6Q96HZ4 224 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 SERAC1Q96JX3 654 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 SLC17A9Q9BYT1 436 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 SCUBE2Q9NQ36 999 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 RXFP3Q9NSD7 469 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 RBM22Q9NW64 420 aaKnown RBP eCLIP15.61■□□□□ 0.091e-10■■■□□ 17.4
C9orf3-217ENST00000479161 HEY1Q9Y5J3 304 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 TP53BP1Q12888 1972 aaPredicted RBP15.61■□□□□ 0.09
C9orf3-217ENST00000479161 LRRK1Q38SD2 2015 aa15.61■□□□□ 0.09
C9orf3-217ENST00000479161 MACROD2A1Z1Q3 448 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 RIOK3O14730 519 aaKnown RBP15.6■□□□□ 0.09
C9orf3-217ENST00000479161 GDF9O60383 454 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 CER1O95813 267 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 TNNT1P13805 278 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 CTSKP43235 329 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 MARCKSL1P49006 195 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 RPL26P61254 145 aaKnown RBP15.6■□□□□ 0.09
C9orf3-217ENST00000479161 GRIK2Q13002 908 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 STAT4Q14765 748 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 PRKD1Q15139 912 aaPredicted RBP15.6■□□□□ 0.09
C9orf3-217ENST00000479161 RSPO4Q2I0M5 234 aaPredicted RBP15.6■□□□□ 0.09
C9orf3-217ENST00000479161 CFAP58Q5T655 872 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 ERAP2Q6P179 960 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 DBX2Q6ZNG2 339 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 DCP2Q8IU60 420 aaKnown RBP15.6■□□□□ 0.09
C9orf3-217ENST00000479161 RAVER1Q8IY67 606 aaKnown RBP15.6■□□□□ 0.09
C9orf3-217ENST00000479161 CCNYQ8ND76 341 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 PDLIM2Q96JY6 352 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 VAT1Q99536 393 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 LGMNQ99538 433 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 OSBPL8Q9BZF1 889 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 NOD2Q9HC29 1040 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 KCTD5Q9NXV2 234 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 PHTF1Q9UMS5 762 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 RPL26L1Q9UNX3 145 aaKnown RBP15.6■□□□□ 0.09
C9orf3-217ENST00000479161 ANKRD6Q9Y2G4 727 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 PCDHGB2Q9Y5G2 931 aa15.6■□□□□ 0.09
C9orf3-217ENST00000479161 NEMP1O14524 444 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 FZD6O60353 706 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 TJP3O95049 919 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 PIGNO95427 931 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 KRT10P13645 584 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 CA4P22748 312 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 XPAP23025 273 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-217ENST00000479161 AKT2P31751 481 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 MMP12P39900 470 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 ID4P47928 161 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 CSNK1EP49674 416 aaKnown RBP15.59■□□□□ 0.09
C9orf3-217ENST00000479161 ATXN3P54252 364 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-217ENST00000479161 BNC1Q01954 994 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 ZNF423Q2M1K9 1284 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 ABI3BPQ7Z7G0 1075 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 CCDC50Q8IVM0 306 aa15.59■□□□□ 0.09
C9orf3-217ENST00000479161 OXR1Q8N573 874 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms