RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 KMT2EQ8IZD2 1858 aa6.3□□□□□ -1.4
SSR3-207ENST00000478842 RAD50Q92878 1312 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 SALL3Q9BXA9 1300 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 IGKV6D-41A0A0C4DH26 115 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 SAC3D1A6NKF1 404 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 TTC34A8MYJ7 566 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 PRKAB2O43741 272 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 PYGLP06737 847 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 SLC3A2P08195 630 aaKnown RBP6.29□□□□□ -1.4
SSR3-207ENST00000478842 ELFN1P0C7U0 828 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 CD53P19397 219 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 RXRAP19793 462 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 FPR3P25089 353 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 ITPKBP27987 946 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 CXCR5P32302 372 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 PCP4P48539 62 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 RPL15P61313 204 aaKnown RBP6.29□□□□□ -1.4
SSR3-207ENST00000478842 RAE1P78406 368 aaKnown RBP6.29□□□□□ -1.4
SSR3-207ENST00000478842 UBE3AQ05086 875 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 RNASELQ05823 741 aaKnown RBP6.29□□□□□ -1.4
SSR3-207ENST00000478842 CTXN3Q4LDR2 81 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 SBK1Q52WX2 424 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 RNASE12Q5GAN4 147 aaKnown RBP6.29□□□□□ -1.4
SSR3-207ENST00000478842 JAKMIP3Q5VZ66 844 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 CTR9Q6PD62 1173 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 SYT13Q7L8C5 426 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 ZNF627Q7L945 461 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 RASGRP2Q7LDG7 609 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 FAM160B2Q86V87 743 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 FSIP1Q8NA03 581 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 TERB1Q8NA31 727 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 NAXEQ8NCW5 288 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 PRSS33Q8NF86 280 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 CEP70Q8NHQ1 597 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 CHURC1Q8WUH1 139 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 DAZAP1Q96EP5 407 aaKnown RBP6.29□□□□□ -1.4
SSR3-207ENST00000478842 HS6ST2Q96MM7 605 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 COG8Q96MW5 612 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 BBC3Q96PG8 261 aaPredicted RBP6.29□□□□□ -1.4
SSR3-207ENST00000478842 MMS19Q96T76 1030 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 TIMP4Q99727 224 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 CHODLQ9H9P2 273 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 RNF146Q9NTX7 359 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 CYP39A1Q9NYL5 469 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 ARPP21Q9UBL0 812 aaPredicted RBP6.29□□□□□ -1.4
SSR3-207ENST00000478842 CLIP2Q9UDT6 1046 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 ADD3Q9UEY8 706 aaKnown RBP6.29□□□□□ -1.4
SSR3-207ENST00000478842 ZFHX2Q9C0A1 2572 aaPredicted RBP6.29□□□□□ -1.4
SSR3-207ENST00000478842 COL4A6Q14031 1691 aa6.29□□□□□ -1.4
SSR3-207ENST00000478842 MICAL3Q7RTP6 2002 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 CYP2D7A0A087X1C5 515 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 PROB1E7EW31 1015 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 H3BNC9 293 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 H3BQ06 376 aaPredicted RBP6.28□□□□□ -1.4
SSR3-207ENST00000478842 H7C1Q1 480 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 MBD4O95243 580 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 MT-CO3P00414 261 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 IGHDP01880 384 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 XBP1P17861 261 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 WT1P19544 449 aaPredicted RBP6.28□□□□□ -1.4
SSR3-207ENST00000478842 GALNSP34059 522 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 DDIT3P35638 169 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 STAT2P52630 851 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 COPB1P53618 953 aaKnown RBP6.28□□□□□ -1.4
SSR3-207ENST00000478842 VAMP2P63027 116 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 DEFB103AP81534 67 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 TBX2Q13207 712 aaPredicted RBP6.28□□□□□ -1.4
SSR3-207ENST00000478842 SLC12A1Q13621 1099 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 PUM1Q14671 1186 aaKnown RBP eCLIP6.28□□□□□ -1.4
SSR3-207ENST00000478842 GPNMBQ14956 572 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 PTGISQ16647 500 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 C16orf89Q6UX73 402 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 Q6ZPA2 131 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 LRRC8DQ7L1W4 858 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 BCDIN3DQ7Z5W3 292 aaKnown RBP6.28□□□□□ -1.4
SSR3-207ENST00000478842 AACSQ86V21 672 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 FBXO16Q8IX29 292 aaPredicted RBP6.28□□□□□ -1.4
SSR3-207ENST00000478842 SIMC1Q8NDZ2 872 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 SRFBP1Q8NEF9 429 aaKnown RBP6.28□□□□□ -1.4
SSR3-207ENST00000478842 PRR11Q96HE9 360 aaPredicted RBP6.28□□□□□ -1.4
SSR3-207ENST00000478842 FYTTD1Q96QD9 318 aaKnown RBP6.28□□□□□ -1.4
SSR3-207ENST00000478842 ADGRE3Q9BY15 652 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 ABHD10Q9NUJ1 306 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 MTMR4Q9NYA4 1195 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 MTUS1Q9ULD2 1270 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 SLC12A4Q9UP95 1085 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 SLC4A4Q9Y6R1 1079 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 TECTAO75443 2155 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 C5orf42Q9H799 3197 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 ZDBF2Q9HCK1 2354 aa6.28□□□□□ -1.4
SSR3-207ENST00000478842 CCDC196A0A1B0GTZ2 297 aa6.27□□□□□ -1.41
SSR3-207ENST00000478842 TMEM221A6NGB7 291 aa6.27□□□□□ -1.41
SSR3-207ENST00000478842 FAM90A20PA6NIJ5 464 aa6.27□□□□□ -1.41
SSR3-207ENST00000478842 TMEM232C9JQI7 657 aa6.27□□□□□ -1.41
SSR3-207ENST00000478842 M0QYT0 321 aa6.27□□□□□ -1.41
SSR3-207ENST00000478842 M0R296 226 aa6.27□□□□□ -1.41
SSR3-207ENST00000478842 HOXC11O43248 304 aaPredicted RBP6.27□□□□□ -1.41
SSR3-207ENST00000478842 TSPAN3O60637 253 aa6.27□□□□□ -1.41
SSR3-207ENST00000478842 PRAMEF2O60811 474 aa6.27□□□□□ -1.41
SSR3-207ENST00000478842 JTBO76095 146 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms