RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 WDR93Q6P2C0 686 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 PGBD2Q6P3X8 592 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 DHRS13Q6UX07 377 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 RHPN2Q8IUC4 686 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 FTOQ9C0B1 505 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS50-214ENST00000477935 ABHD16BQ9H3Z7 469 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 RPAP3Q9H6T3 665 aaPredicted RBP5.08□□□□□ -1.6
VPS50-214ENST00000477935 PRDM16Q9HAZ2 1276 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 MOV10Q9HCE1 1003 aaKnown RBP5.08□□□□□ -1.6
VPS50-214ENST00000477935 NFU1Q9UMS0 254 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 VPS13AQ96RL7 3174 aa5.08□□□□□ -1.6
VPS50-214ENST00000477935 MAP1BP46821 2468 aaKnown RBP5.08□□□□□ -1.6
VPS50-214ENST00000477935 SPTBN2O15020 2390 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 PDS5AQ29RF7 1337 aaKnown RBP5.07□□□□□ -1.6
VPS50-214ENST00000477935 LGALS16A8MUM7 142 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 LOC730098B7Z3J9 87 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 SOCS2O14508 198 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 KAT7O95251 611 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 GJB5O95377 273 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 RFPL3SP0C7P2 107 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 PDIA3P30101 505 aaKnown RBP5.07□□□□□ -1.6
VPS50-214ENST00000477935 ACVR2BQ13705 512 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 LAMB3Q13751 1172 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 PTK2BQ14289 1009 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 PFKFB4Q16877 469 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 ANXA2RQ3ZCQ2 193 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 LRRC24Q50LG9 513 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 BEND3Q5T5X7 828 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 ANKRD40Q6AI12 368 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 ZNF793Q6ZN11 406 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 FAM57BQ71RH2 274 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 DEFB128Q7Z7B8 93 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 PIP4P1Q86T03 277 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 NRACQ8N912 160 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 SRFBP1Q8NEF9 429 aaKnown RBP5.07□□□□□ -1.6
VPS50-214ENST00000477935 KCNG4Q8TDN1 519 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 KAT2BQ92831 832 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 REXO5Q96IC2 774 aaKnown RBP5.07□□□□□ -1.6
VPS50-214ENST00000477935 CRB3Q9BUF7 120 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 TRPV6Q9H1D0 765 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 CCDC134Q9H6E4 229 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 HEY2Q9UBP5 337 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 ZHX1Q9UKY1 873 aaPredicted RBP5.07□□□□□ -1.6
VPS50-214ENST00000477935 SMCHD1A6NHR9 2005 aa5.07□□□□□ -1.6
VPS50-214ENST00000477935 DMXL1Q9Y485 3027 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 USP24Q9UPU5 2620 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 LY6G6EA0A0G2JKS1 128 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 LINC01553A4QN01 128 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 PPP6R2O75170 966 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 SKAP2O75563 359 aaPredicted RBP5.06□□□□□ -1.6
VPS50-214ENST00000477935 BAG3O95817 575 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 SNAI1O95863 264 aaPredicted RBP5.06□□□□□ -1.6
VPS50-214ENST00000477935 GH2P01242 217 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 IGKV2-30P06310 120 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 IQCF3P0C7M6 154 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 PEPDP12955 493 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 TFEBP19484 476 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 ICAM3P32942 547 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 CLCN5P51795 746 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 SLC37A1P57057 533 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 SRSF1Q07955 248 aaKnown RBP eCLIP5.06□□□□□ -1.6
VPS50-214ENST00000477935 GALNT1Q10472 559 aaPredicted RBP5.06□□□□□ -1.6
VPS50-214ENST00000477935 MTX1Q13505 466 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 TCEAL5Q5H9L2 206 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 LIPMQ5VYY2 423 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 ZNF474Q6S9Z5 364 aaPredicted RBP5.06□□□□□ -1.6
VPS50-214ENST00000477935 CXCL17Q6UXB2 119 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 G2E3Q7L622 706 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 GLCCI1Q86VQ1 547 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 TEX11Q8IYF3 940 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 ADGRF4Q8IZF3 695 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 ARL14EPQ8N8R7 260 aaPredicted RBP5.06□□□□□ -1.6
VPS50-214ENST00000477935 OR1N1Q8NGS0 311 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 ZFPM2Q8WW38 1151 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 HMCESQ96FZ2 354 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 ZFYVE19Q96K21 471 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 MPHOSPH6Q99547 160 aaKnown RBP5.06□□□□□ -1.6
VPS50-214ENST00000477935 ALDH8A1Q9H2A2 487 aaPredicted RBP5.06□□□□□ -1.6
VPS50-214ENST00000477935 ERVK-5Q9HDB9 667 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 PLCB1Q9NQ66 1216 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 TMEM45AQ9NWC5 275 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 CD207Q9UJ71 328 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 RAB21Q9UL25 225 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 MTUS1Q9ULD2 1270 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 Q9Y3F1 56 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 DAAM1Q9Y4D1 1078 aa5.06□□□□□ -1.6
VPS50-214ENST00000477935 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.06□□□□□ -1.6
VPS50-214ENST00000477935 COL4A6Q14031 1691 aa5.05□□□□□ -1.6
VPS50-214ENST00000477935 GRIN2DO15399 1336 aa5.05□□□□□ -1.6
VPS50-214ENST00000477935 DOCK2Q92608 1830 aa5.05□□□□□ -1.6
VPS50-214ENST00000477935 ZNF236Q9UL36 1845 aa5.05□□□□□ -1.6
VPS50-214ENST00000477935 C3orf70A6NLC5 250 aaPredicted RBP5.05□□□□□ -1.6
VPS50-214ENST00000477935 F8W810 466 aa5.05□□□□□ -1.6
VPS50-214ENST00000477935 EYA2O00167 538 aa5.05□□□□□ -1.6
VPS50-214ENST00000477935 SYT5O00445 386 aa5.05□□□□□ -1.6
VPS50-214ENST00000477935 CTAGE5O15320 804 aa5.05□□□□□ -1.6
VPS50-214ENST00000477935 CNTN5O94779 1100 aa5.05□□□□□ -1.6
VPS50-214ENST00000477935 BMP15O95972 392 aa5.05□□□□□ -1.6
VPS50-214ENST00000477935 ALDOAP04075 364 aaKnown RBP5.05□□□□□ -1.6
VPS50-214ENST00000477935 PGK2P07205 417 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms