RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ENPP2Q13822 863 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 BYSLQ13895 437 aaKnown RBP4.81□□□□□ -1.64
CKS1B-207ENST00000477676 ANO4Q32M45 955 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 FUT11Q495W5 492 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 KCNT1Q5JUK3 1230 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 HECTD3Q5T447 861 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 TMEM215Q68D42 235 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 LAYNQ6UX15 382 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 SLC36A4Q6YBV0 504 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 TPGS1Q6ZTW0 290 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 HTR3DQ70Z44 454 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 MTDHQ86UE4 582 aaKnown RBP4.81□□□□□ -1.64
CKS1B-207ENST00000477676 WDR49Q8IV35 697 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 ZCCHC9Q8N567 271 aaKnown RBP4.81□□□□□ -1.64
CKS1B-207ENST00000477676 C12orf29Q8N999 325 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 OR6B3Q8NGW1 331 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 FBXO32Q969P5 355 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 ZNF669Q96BR6 464 aaPredicted RBP4.81□□□□□ -1.64
CKS1B-207ENST00000477676 OTUB2Q96DC9 234 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 ANKRD36BP1Q96IX9 119 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 LRIG1Q96JA1 1093 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 PLEKHG4BQ96PX9 1271 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 OR14A2Q96R54 314 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 MMS19Q96T76 1030 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 CDC6Q99741 560 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 ORAI3Q9BRQ5 295 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 GPR174Q9BXC1 333 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 TRIM55Q9BYV6 548 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 ELOVL4Q9GZR5 314 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 NELFAQ9H3P2 528 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 CATSPERZQ9NTU4 200 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 PANK4Q9NVE7 773 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 DNAJC17Q9NVM6 304 aaKnown RBP4.81□□□□□ -1.64
CKS1B-207ENST00000477676 WSB2Q9NYS7 404 aaPredicted RBP4.81□□□□□ -1.64
CKS1B-207ENST00000477676 USP36Q9P275 1121 aaKnown RBP4.81□□□□□ -1.64
CKS1B-207ENST00000477676 TBC1D14Q9P2M4 693 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 DEC1Q9P2X7 70 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 PPARGC1AQ9UBK2 798 aaKnown RBP4.81□□□□□ -1.64
CKS1B-207ENST00000477676 DKK4Q9UBT3 224 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 SRPRBQ9Y5M8 271 aaKnown RBP4.81□□□□□ -1.64
CKS1B-207ENST00000477676 ATP23Q9Y6H3 246 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 SLC30A1Q9Y6M5 507 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 PRRC2CQ9Y520 2896 aaKnown RBP4.81□□□□□ -1.64
CKS1B-207ENST00000477676 LRRK2Q5S007 2527 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 A0A1B0GVT2 93 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 TRABD2BA6NFA1 517 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 ZNF233A6NK53 670 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 A8MXQ7 604 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 NEDD8-MDP1E9PL57 170 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 CBX4O00257 560 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 KCNK3O14649 394 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 RTN3O95197 1032 aaPredicted RBP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 TNNC2P02585 160 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 LTFP02788 710 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 ADH4P08319 380 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 DLATP10515 647 aaKnown RBP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 PRKCHP24723 683 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 ANXA13P27216 316 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 ITPKBP27987 946 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 CASP1P29466 404 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 CD6P30203 668 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 DPP6P42658 865 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 TUBP50607 506 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 TPMTP51580 245 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 CYP2J2P51589 502 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 MYO1EQ12965 1108 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 TOP3AQ13472 1001 aaPredicted RBP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 PSMD6Q15008 389 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 MAPRE1Q15691 268 aaKnown RBP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 GPR19Q15760 415 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 SNRNP35Q16560 246 aaKnown RBP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 GEN1Q17RS7 908 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 HLA-BQ31612 363 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 C1orf220Q5T0J3 134 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 FNDC7Q5VTL7 733 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 DCAF12L1Q5VU92 463 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 RRAGBQ5VZM2 374 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 GRAMD4Q6IC98 578 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 PCSK4Q6UW60 755 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 KIAA1324Q6UXG2 1013 aaKnown RBP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 SCARA5Q6ZMJ2 495 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 MAMDC2Q7Z304 686 aaPredicted RBP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 SCD5Q86SK9 330 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 ACOT1Q86TX2 421 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 DDX42Q86XP3 938 aaKnown RBP eCLIP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 CACUL1Q86Y37 369 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 ZC3H3Q8IXZ2 948 aaKnown RBP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 CHPFQ8IZ52 775 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 SYCP3Q8IZU3 236 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 RASSF8Q8NHQ8 419 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 SCFD1Q8WVM8 642 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 SORCS1Q8WY21 1168 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 OVCA2Q8WZ82 227 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 CCDC127Q96BQ5 260 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 PIWIL1Q96J94 861 aaKnown RBP4.8□□□□□ -1.64
CKS1B-207ENST00000477676 SLITRK1Q96PX8 696 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 TWNKQ96RR1 684 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 CGRRF1Q99675 332 aa4.8□□□□□ -1.64
CKS1B-207ENST00000477676 BBS2Q9BXC9 721 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms