RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 DENND6BQ8NEG7 585 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 SLC35G2Q8TBE7 412 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 CXorf40AQ8TE69 158 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 IFT43Q96FT9 208 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 GPR27Q9NS67 375 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 SPTLC3Q9NUV7 552 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 KLK13Q9UKR3 277 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 MSRB2Q9Y3D2 182 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 SPTY2D1-AS1A0A0U1RR47 76 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 RIOK3O14730 519 aaKnown RBP12.35□□□□□ -0.43
PTPN7-210ENST00000477625 HSPA9P38646 679 aaKnown RBP12.35□□□□□ -0.43
PTPN7-210ENST00000477625 ARHGAP25P42331 645 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 TAS2R40P59535 323 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 PFN3P60673 137 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 AP1S1P61966 158 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 POLR2LP62875 67 aaKnown RBP12.35□□□□□ -0.43
PTPN7-210ENST00000477625 BCL2L1Q07817 233 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 MMRN1Q13201 1228 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 MESDQ14696 234 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 ANKRD20A8PQ5CZ79 823 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 ERAP2Q6P179 960 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 PTAR1Q7Z6K3 402 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-210ENST00000477625 MAP7D3Q8IWC1 876 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 RHOT2Q8IXI1 618 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 SLC25A45Q8N413 288 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 ATPAF2Q8N5M1 289 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 PCDH19Q8TAB3 1148 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 NSMCE1Q8WV22 266 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 ECHDC3Q96DC8 303 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 CNDP2Q96KP4 475 aaKnown RBP12.35□□□□□ -0.43
PTPN7-210ENST00000477625 ZNF670Q9BS34 389 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 WRAP53Q9BUR4 548 aaKnown RBP12.35□□□□□ -0.43
PTPN7-210ENST00000477625 C1QTNF7Q9BXJ2 289 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 PCDH12Q9NPG4 1184 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 SPEGQ15772 3267 aa12.35□□□□□ -0.43
PTPN7-210ENST00000477625 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-210ENST00000477625 TMEM110-MUSTN1A8MSY1 372 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 C1QTNF9BB2RNN3 333 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 TRAFD1O14545 582 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-210ENST00000477625 ENC1O14682 589 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 SDC3O75056 442 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 MTA2O94776 668 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 C1QTNF9P0C862 333 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 DGKAP23743 735 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 GJC1P36383 396 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 PDE1CQ14123 709 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-210ENST00000477625 FZD2Q14332 565 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 ZNF235Q14590 738 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 PAFAH1B3Q15102 231 aaKnown RBP12.34□□□□□ -0.43
PTPN7-210ENST00000477625 MARC1Q5VT66 337 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 UNQ6494/PRO21346Q6UXR6 183 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 ZSWIM9Q86XI8 627 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 BBS5Q8N3I7 341 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 NSMCE3Q96MG7 304 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 TMEM121BQ9BXQ6 578 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-210ENST00000477625 DNAJC28Q9NX36 388 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 INTUQ9ULD6 942 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 ATP8A1Q9Y2Q0 1164 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 EPG5Q9HCE0 2579 aa12.34□□□□□ -0.43
PTPN7-210ENST00000477625 TP53BP1Q12888 1972 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-210ENST00000477625 ASPMQ8IZT6 3477 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-210ENST00000477625 CFAP69A5D8W1 941 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 TOR1BO14657 336 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 PIAS2O75928 621 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 CSF2P04141 144 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 PROS1P07225 676 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 C1SP09871 688 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 CR2P20023 1033 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 KDELR1P24390 212 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 MMP12P39900 470 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 GARSP41250 739 aaKnown RBP12.33□□□□□ -0.44
PTPN7-210ENST00000477625 LIG3P49916 1009 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 HNRNPKP61978 463 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTPN7-210ENST00000477625 YPEL5P62699 121 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 GALNT2Q10471 571 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 ZNF211Q13398 564 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-210ENST00000477625 LRRC14Q15048 493 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 TCEAL1Q15170 157 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 CCDC157Q569K6 752 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 ZNF542PQ5EBM4 170 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 RALGPS1Q5JS13 557 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 NCBP2-AS2Q69YL0 99 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 TMPRSS7Q7RTY8 843 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 PARGQ86W56 976 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 PGBD5Q8N414 524 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 PAF1Q8N7H5 531 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 TC2NQ8N9U0 490 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 TP53I13Q8NBR0 393 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-210ENST00000477625 RFFLQ8WZ73 363 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 SPOCK2Q92563 424 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 RAPGEF5Q92565 580 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 GATA6Q92908 595 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 FAF2Q96CS3 445 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 NUDCD1Q96RS6 583 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 MGME1Q9BQP7 344 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 NOD2Q9HC29 1040 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 SCUBE2Q9NQ36 999 aa12.33□□□□□ -0.44
PTPN7-210ENST00000477625 MBNL1Q9NR56 388 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms