RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 FYB2Q5VWT5 728 aa23.21■■□□□ 1.31
CCDC7-206ENST00000476558 ATG16L1Q676U5 607 aa23.21■■□□□ 1.31
CCDC7-206ENST00000476558 SPRED2Q7Z698 418 aa23.21■■□□□ 1.31
CCDC7-206ENST00000476558 TDRD5Q8NAT2 981 aaKnown RBP23.21■■□□□ 1.31
CCDC7-206ENST00000476558 SHKBP1Q8TBC3 707 aa23.21■■□□□ 1.31
CCDC7-206ENST00000476558 CALML6Q8TD86 181 aa23.21■■□□□ 1.31
CCDC7-206ENST00000476558 C7orf26Q96N11 449 aa23.21■■□□□ 1.31
CCDC7-206ENST00000476558 MFSD1Q9H3U5 465 aa23.21■■□□□ 1.31
CCDC7-206ENST00000476558 ZNF358Q9NW07 568 aa23.21■■□□□ 1.31
CCDC7-206ENST00000476558 ARHGAP26Q9UNA1 814 aa23.21■■□□□ 1.31
CCDC7-206ENST00000476558 SH3BP1Q9Y3L3 701 aa23.21■■□□□ 1.31
CCDC7-206ENST00000476558 KCTD3Q9Y597 815 aa23.21■■□□□ 1.31
CCDC7-206ENST00000476558 LEFTY2O00292 366 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 MOSPD3O75425 235 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 NEFHP12036 1026 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 SYN1P17600 705 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 CSKP41240 450 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 OCRLQ01968 901 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 CHI3L2Q15782 390 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 CCDC153Q494R4 210 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 GALNTL6Q49A17 601 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 FASTKD1Q53R41 847 aaKnown RBP23.2■■□□□ 1.3
CCDC7-206ENST00000476558 LINGO4Q6UY18 593 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 DCAF4L2Q8NA75 395 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 THOC1Q96FV9 657 aaKnown RBP23.2■■□□□ 1.3
CCDC7-206ENST00000476558 EXOC2Q96KP1 924 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 C1QTNF1Q9BXJ1 281 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 TDRD1Q9BXT4 1180 aaKnown RBP23.2■■□□□ 1.3
CCDC7-206ENST00000476558 SCUBE2Q9NQ36 999 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 LHX3Q9UBR4 397 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 VPS51Q9UID3 782 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 VPS28Q9UK41 221 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 USH1CQ9Y6N9 552 aa23.2■■□□□ 1.3
CCDC7-206ENST00000476558 HAUS5O94927 633 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 ARHGEF15O94989 841 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 ALDH3A1P30838 453 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 LEPRP48357 1165 aaKnown RBP23.19■■□□□ 1.3
CCDC7-206ENST00000476558 IRF9Q00978 393 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 CDH18Q13634 790 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 PCLAFQ15004 111 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 MBLAC2Q68D91 279 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 FITM2Q8N6M3 262 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.19■■□□□ 1.3
CCDC7-206ENST00000476558 CHKBQ9Y259 395 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 ANKRD6Q9Y2G4 727 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 NOTCH4Q99466 2003 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 RFPL2O75678 378 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 FGF19O95750 216 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 TROVE2P10155 538 aaKnown RBP eCLIP23.19■■□□□ 1.3
CCDC7-206ENST00000476558 PSMA3P25788 255 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 CD151P48509 253 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 IRX4P78413 519 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 TMPRSS15P98073 1019 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 CCDC15Q0P6D6 951 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 OVGP1Q12889 678 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 USP10Q14694 798 aaKnown RBP23.19■■□□□ 1.3
CCDC7-206ENST00000476558 MPPE1Q53F39 396 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 LCA5Q86VQ0 697 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 LMNTD2Q8IXW0 634 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 HDAC10Q969S8 669 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 NPHS2Q9NP85 383 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 COPG2Q9UBF2 871 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 ARL5AQ9Y689 179 aa23.19■■□□□ 1.3
CCDC7-206ENST00000476558 ANKRD36A6QL64 1941 aa23.18■■□□□ 1.3
CCDC7-206ENST00000476558 SLC35E2BP0CK96 405 aa23.18■■□□□ 1.3
CCDC7-206ENST00000476558 FGF3P11487 239 aaPredicted RBP23.18■■□□□ 1.3
CCDC7-206ENST00000476558 PTPN2P17706 415 aa23.18■■□□□ 1.3
CCDC7-206ENST00000476558 HOXA9P31269 272 aa23.18■■□□□ 1.3
CCDC7-206ENST00000476558 IRS1P35568 1242 aa23.18■■□□□ 1.3
CCDC7-206ENST00000476558 CILP2Q8IUL8 1156 aa23.18■■□□□ 1.3
CCDC7-206ENST00000476558 MFN1Q8IWA4 741 aa23.18■■□□□ 1.3
CCDC7-206ENST00000476558 BLOC1S5Q8TDH9 187 aa23.18■■□□□ 1.3
CCDC7-206ENST00000476558 DDI1Q8WTU0 396 aa23.18■■□□□ 1.3
CCDC7-206ENST00000476558 TCEAL4Q96EI5 215 aa23.18■■□□□ 1.3
CCDC7-206ENST00000476558 ACTR5Q9H9F9 607 aaPredicted RBP23.18■■□□□ 1.3
CCDC7-206ENST00000476558 KCNK13Q9HB14 408 aa23.18■■□□□ 1.3
CCDC7-206ENST00000476558 MAN1C1Q9NR34 630 aa23.18■■□□□ 1.3
CCDC7-206ENST00000476558 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.18■■□□□ 1.3
CCDC7-206ENST00000476558 FAM95CA0A1B0GW59 222 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 E2F8A0AVK6 867 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 AURKAO14965 403 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 GRM6O15303 877 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 FSBPO95073 299 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 CSPG5O95196 566 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 DDX6P26196 483 aaKnown RBP eCLIP23.17■■□□□ 1.3
CCDC7-206ENST00000476558 NCEH1Q6PIU2 408 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 RNF135Q8IUD6 432 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 SLC41A1Q8IVJ1 513 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 APCDD1Q8J025 514 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 OR6Y1Q8NGX8 325 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 RFWD2Q8NHY2 731 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 GABPB2Q8TAK5 448 aaPredicted RBP23.17■■□□□ 1.3
CCDC7-206ENST00000476558 FIBINQ8TAL6 211 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 TRIM55Q9BYV6 548 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 C20orf27Q9GZN8 174 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 CLEC4EQ9ULY5 219 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 SLC12A4Q9UP95 1085 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 RAI2Q9Y5P3 530 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 RB1P06400 928 aa23.17■■□□□ 1.3
CCDC7-206ENST00000476558 DLDP09622 509 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms