RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 MRGPREQ86SM8 312 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 GLRX5Q86SX6 157 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 MINDY1Q8N5J2 469 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 PSPC1Q8WXF1 523 aaKnown RBP4.34□□□□□ -1.71
VPS13D-207ENST00000476169 AKAP1Q92667 903 aaKnown RBP eCLIP4.34□□□□□ -1.71
VPS13D-207ENST00000476169 C20orf173Q96LM9 149 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 AK8Q96MA6 479 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 FIZ1Q96SL8 496 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 FERMT1Q9BQL6 677 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 PI4K2AQ9BTU6 479 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 ADGRE3Q9BY15 652 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 RNF26Q9BY78 433 aaPredicted RBP4.34□□□□□ -1.71
VPS13D-207ENST00000476169 NUF2Q9BZD4 464 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 PLK3Q9H4B4 646 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 ENTPD7Q9NQZ7 604 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 SLC6A13Q9NSD5 602 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 SH3BP4Q9P0V3 963 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 LRIT1Q9P2V4 623 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 EPS15L1Q9UBC2 864 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 HDAC6Q9UBN7 1215 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 ANAPC2Q9UJX6 822 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 MAFFQ9ULX9 164 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 A4GNTQ9UNA3 340 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 DHDHQ9UQ10 334 aa4.34□□□□□ -1.71
VPS13D-207ENST00000476169 BICRAQ9NZM4 1560 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 MAST3O60307 1309 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 LOC100509620A0A075B734 347 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 CCDC151A5D8V7 595 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 LRRC72A6NJI9 287 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 LINC00473A8K010 186 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 CDRT15L2A8MXV6 281 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 TTC34A8MYJ7 566 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 ZNF263O14978 683 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 PPFIA2O75334 1257 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 AVILO75366 819 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 SLC25A12O75746 678 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 KAT7O95251 611 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 PENKP01210 267 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 SRPRAP08240 638 aaKnown RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 P4HA1P13674 534 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 GAP43P17677 238 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 IGFBP2P18065 325 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 MAPK3P27361 379 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 GJC1P36383 396 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 CD86P42081 329 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 GRIA3P42263 894 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 PIP4K2AP48426 406 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 CLK3P49761 638 aaKnown RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 AGTR2P50052 363 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 CCT8P50990 548 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 BMXP51813 675 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 EFNA5P52803 228 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 OAZ1P54368 228 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 WDR5P61964 334 aaKnown RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 SHC2P98077 582 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 IL1RL1Q01638 556 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 TAP1Q03518 808 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 ACTN3Q08043 901 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 C17orf67Q0P5P2 114 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 CBX3Q13185 183 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 BAATQ14032 418 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 IL11RAQ14626 422 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 CNGA3Q16281 694 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 ERCC6LQ2NKX8 1250 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 SETMARQ53H47 684 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 RNASE12Q5GAN4 147 aaKnown RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 SERTAD4-AS1Q5TG53 156 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 CASC1Q6TDU7 716 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 IL20RBQ6UXL0 311 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 SLC39A5Q6ZMH5 540 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 GLDNQ6ZMI3 551 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 TTLL10Q6ZVT0 673 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 SLC9B2Q86UD5 537 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 SYCP3Q8IZU3 236 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 IQUBQ8NA54 791 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 ADPRHL1Q8NDY3 354 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 ACTRT2Q8TDY3 377 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 C2CD4CQ8TF44 421 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 TMEM237Q96Q45 408 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 FYTTD1Q96QD9 318 aaKnown RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 MMS19Q96T76 1030 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 THAP7Q9BT49 309 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 H2AFJQ9BTM1 129 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 KRTAP3-1Q9BYR8 98 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 CIPCQ9C0C6 399 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 TNMDQ9H2S6 317 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 TRMT1Q9NXH9 659 aaKnown RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 NCKIPSDQ9NZQ3 722 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 CACNG4Q9UBN1 327 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 UPB1Q9UBR1 384 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 UBA2Q9UBT2 640 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-207ENST00000476169 TUBE1Q9UJT0 475 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 FZD4Q9ULV1 537 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 ST3GAL5Q9UNP4 418 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 TRIM17Q9Y577 477 aa4.33□□□□□ -1.72
VPS13D-207ENST00000476169 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.32□□□□□ -1.72
VPS13D-207ENST00000476169 A0A1W2PRG0 241 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 TRIM64CA6NLI5 447 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 USP17L23D6RBM5 183 aa4.32□□□□□ -1.72
VPS13D-207ENST00000476169 DSCR3O14972 297 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms